RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 LACTB2Q53H82 288 aaPredicted RBP13.9□□□□□ -0.18
SEC13-208ENST00000397109 GARNL3Q5VVW2 1013 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 TCTN3Q6NUS6 607 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 MED25Q71SY5 747 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 ADCK2Q7Z695 626 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 C17orf64Q86WR6 236 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 TMEM102Q8N9M5 508 aaPredicted RBP13.9□□□□□ -0.18
SEC13-208ENST00000397109 NACC2Q96BF6 587 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 MTBPQ96DY7 904 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 SMC6Q96SB8 1091 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 PAFAH2Q99487 392 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 GPR22Q99680 433 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 HAUS8Q9BT25 410 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 ING2Q9H160 280 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 WDR54Q9H977 334 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 POPDC3Q9HBV1 291 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 ARL15Q9NXU5 204 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 NKIRAS1Q9NYS0 192 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 CDC14AQ9UNH5 594 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 ARGFXA6NJG6 315 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 NRP2O60462 931 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 INHBAP08476 426 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 KRT15P19012 456 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 SPRP35270 261 aaPredicted RBP13.89□□□□□ -0.19
SEC13-208ENST00000397109 SERPINB9P50453 376 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 TAS2R39P59534 338 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 POU4F1Q01851 419 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 SLC9A5Q14940 896 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 PHKG1Q16816 387 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 CAPN13Q6MZZ7 669 aaPredicted RBP13.89□□□□□ -0.19
SEC13-208ENST00000397109 LCTLQ6UWM7 567 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 CSNK1A1LQ8N752 337 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 FBXL8Q96CD0 374 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 THAP11Q96EK4 314 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 MVB12AQ96EY5 273 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 TSPAN17Q96FV3 270 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 CABS1Q96KC9 395 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 OR2A5Q96R48 311 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 SGPP1Q9BX95 441 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 SLC26A1Q9H2B4 701 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 SLC22A11Q9NSA0 550 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 TLK1Q9UKI8 766 aa13.89□□□□□ -0.19
SEC13-208ENST00000397109 NXT1Q9UKK6 140 aaKnown RBP13.89□□□□□ -0.19
SEC13-208ENST00000397109 G3BP2Q9UN86 482 aaKnown RBP13.89□□□□□ -0.19
SEC13-208ENST00000397109 TMEM120BA0PK00 339 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 H7BY64 318 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 PEX12O00623 359 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 PLA2G2AP14555 144 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 OTX2P32243 289 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 PGGT1BP53609 377 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 RPS15AP62244 130 aaKnown RBP13.88□□□□□ -0.19
SEC13-208ENST00000397109 FAM69BQ5VUD6 431 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 TMEM207Q6UWW9 146 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 MBOAT1Q6ZNC8 495 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 CYP4X1Q8N118 509 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 OR56A3Q8NH54 315 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 DCAKDQ8WVC6 231 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 CHMP6Q96FZ7 201 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 FER1L6-AS2Q96M78 137 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 PRAP1Q96NZ9 151 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 ATG10Q9H0Y0 220 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 GPAMQ9HCL2 828 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 ZNF304Q9HCX3 659 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 ZNF71Q9NQZ8 489 aaPredicted RBP13.88□□□□□ -0.19
SEC13-208ENST00000397109 CUEDC1Q9NWM3 386 aaPredicted RBP13.88□□□□□ -0.19
SEC13-208ENST00000397109 TBK1Q9UHD2 729 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 PCDHGA9Q9Y5G4 932 aaKnown RBP13.88□□□□□ -0.19
SEC13-208ENST00000397109 BOD1L1Q8NFC6 3051 aa13.88□□□□□ -0.19
SEC13-208ENST00000397109 KCNE1BA0A087WTH5 132 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 HMX2A2RU54 273 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 NDUFAB1O14561 156 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 HAT1O14929 419 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 SUV39H1O43463 412 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 SLC28A2O43868 658 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 CNOT3O75175 753 aaKnown RBP13.87□□□□□ -0.19
SEC13-208ENST00000397109 KRT38O76015 456 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 ITGAXP20702 1163 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 GRK3P35626 688 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 OR1D4P47884 311 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 CCL11P51671 97 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 NKG7Q16617 165 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 NDUFA9Q16795 377 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 SBSNQ6UWP8 590 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 ATG14Q6ZNE5 492 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 COX15Q7KZN9 410 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 PRICKLE2Q7Z3G6 844 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 MRGPREQ86SM8 312 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 ADAMTSL2Q86TH1 951 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 SRRM1Q8IYB3 904 aaKnown RBP13.87□□□□□ -0.19
SEC13-208ENST00000397109 COL26A1Q96A83 441 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 VPS50Q96JG6 964 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 C10orf90Q96M02 699 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 CCT8L2Q96SF2 557 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 SLC25A23Q9BV35 468 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 TRIM55Q9BYV6 548 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 CTNNAL1Q9UBT7 734 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 ANAPC2Q9UJX6 822 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 RUVBL1Q9Y265 456 aaKnown RBP13.87□□□□□ -0.19
SEC13-208ENST00000397109 TP53TG5Q9Y2B4 290 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms