RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 MFSD4BQ5TF39 518 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 CEP97Q8IW35 865 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 BEST3Q8N1M1 668 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 GHDCQ8N2G8 530 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 OR51Q1Q8NH59 317 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 ZNF480Q8WV37 535 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 PKP4Q99569 1192 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 VKORC1Q9BQB6 163 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 ITGB1BP2Q9UKP3 347 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 A0A0U1RQJ8 604 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 FAM227AF5H4B4 570 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 ASNA1O43681 348 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 NIPSNAP2O75323 286 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 ENO3P13929 434 aaPredicted RBP16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 NMBRP28336 390 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 CD96P40200 585 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 BCL6P41182 706 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 XCR1P46094 333 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 MAT1AQ00266 395 aaKnown RBP16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 TESK1Q15569 626 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 SYT16Q17RD7 645 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 ACSBG2Q5FVE4 666 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 THEMIS2Q5TEJ8 643 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 DRICH1Q6PGQ1 229 aaPredicted RBP16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 SLC13A5Q86YT5 568 aaPredicted RBP16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 RNF10Q8N5U6 811 aaKnown RBP16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 CAMKVQ8NCB2 501 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 OR9A4Q8NGU2 314 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 ASB11Q8WXH4 323 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 FRMD6Q96NE9 622 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 LPAR4Q99677 370 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 ENKD1Q9H0I2 346 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 MCCC2Q9HCC0 563 aa16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 INTS10Q9NVR2 710 aaKnown RBP16.52■□□□□ 0.24
EXOSC3-202ENST00000396521 PRRG2O14669 202 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 TSPAN12O95859 305 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 ABOP16442 354 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 ARNTP27540 789 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 SKP1P63208 163 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 PMP22Q01453 160 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 MEF2AQ02078 507 aaPredicted RBP16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 ACTN3Q08043 901 aaPredicted RBP16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 CCNG2Q16589 344 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 NIPAL1Q6NVV3 410 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 RAD9BQ6WBX8 426 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 ANKRD37Q7Z713 158 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 REXO1L1PQ8IX06 675 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 ACBD4Q8NC06 268 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 PLPP5Q8NEB5 264 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 OR1F2PQ96R84 312 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 OLFM1Q99784 485 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 ANKHQ9HCJ1 492 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 COQ3Q9NZJ6 369 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 ZKSCAN5Q9Y2L8 839 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 CRYL1Q9Y2S2 319 aa16.51■□□□□ 0.23
EXOSC3-202ENST00000396521 NPIPA5E9PKD4 350 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 H7BY64 318 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 GFYI3L273 518 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 EIF3FO00303 357 aaPredicted RBP16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 HAT1O14929 419 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 P2RX6O15547 441 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 SP1P08047 785 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 MPC1LP0DKB6 136 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 RPL22P35268 128 aaKnown RBP16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 SKIV2L2P42285 1042 aaKnown RBP16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 CRADDP78560 199 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 SARNPP82979 210 aaKnown RBP16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 MPP1Q00013 466 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 OC90Q02509 493 aaPredicted RBP16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 NSDHLQ15738 373 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 KIAA0930Q6ICG6 404 aaPredicted RBP16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 SPINK14Q6IE38 97 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 SLC25A25Q6KCM7 469 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 TMEM214Q6NUQ4 689 aaKnown RBP16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 LANCL3Q6ZV70 420 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 CDH24Q86UP0 819 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 CRLF3Q8IUI8 442 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 CILP2Q8IUL8 1156 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 SIAH3Q8IW03 269 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 POGLUT1Q8NBL1 392 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 ACRBPQ8NEB7 543 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 CA5BP1Q8WTZ4 195 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 C1orf54Q8WWF1 131 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 KCNJ9Q92806 393 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 MFSD3Q96ES6 412 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 PRAP1Q96NZ9 151 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 SIGLEC12Q96PQ1 595 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 CCDC68Q9H2F9 335 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 SYNPO2LQ9H987 977 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 KLHL1Q9NR64 748 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 SOX13Q9UN79 622 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 NPIPA1Q9UND3 350 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 SLC22A7Q9Y694 548 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 COMMD10Q9Y6G5 202 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 ZFHX3Q15911 3703 aa16.5■□□□□ 0.23
EXOSC3-202ENST00000396521 MAGEB16A2A368 324 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 MAGEB17A8MXT2 336 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 ETS1P14921 441 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 GRK3P35626 688 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 KIR3DL1P43629 444 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms