RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ITPR1Q14643 2758 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 KCNE1BA0A087WTH5 132 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 CCDC189A1A4V9 331 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 LRRC14BA6NHZ5 514 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 K7ENP7 123 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 KLK8O60259 260 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 CCNT2O60583 730 aaKnown RBP15.79■□□□□ 0.12
CXCL1-201ENST00000395761 PRAMEF4O60810 478 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 KATNA1O75449 491 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 IPO13O94829 963 aaKnown RBP15.79■□□□□ 0.12
CXCL1-201ENST00000395761 RBP1P09455 135 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 SBK3P0C264 359 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 PYGBP11216 843 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 ITGAXP20702 1163 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 ARSFP54793 590 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 SNRPNP63162 240 aaKnown RBP15.79■□□□□ 0.12
CXCL1-201ENST00000395761 NFKB2Q00653 900 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 VAC14Q08AM6 782 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 DNASE1L3Q13609 305 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 TSNAXIP1Q2TAA8 658 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 PRAMEF9Q5VWM5 478 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 INO80CQ6PI98 192 aaPredicted RBP15.79■□□□□ 0.12
CXCL1-201ENST00000395761 SLCO4C1Q6ZQN7 724 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 TMPRSS11BQ86T26 416 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 EXOC3L1Q86VI1 746 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 LCA5Q86VQ0 697 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 TMEM151AQ8N4L1 468 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 METTL27Q8N6F8 245 aaPredicted RBP15.79■□□□□ 0.12
CXCL1-201ENST00000395761 MFSD9Q8NBP5 474 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 UBTD2Q8WUN7 234 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 RERGQ96A58 199 aaPredicted RBP15.79■□□□□ 0.12
CXCL1-201ENST00000395761 KIAA1143Q96AT1 154 aaPredicted RBP15.79■□□□□ 0.12
CXCL1-201ENST00000395761 ARL8AQ96BM9 186 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 C10orf90Q96M02 699 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 TXLNGQ9NUQ3 528 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 CPSF2Q9P2I0 782 aaKnown RBP15.79■□□□□ 0.12
CXCL1-201ENST00000395761 XPR1Q9UBH6 696 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 NDOR1Q9UHB4 597 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 PCDHGA4Q9Y5G9 962 aa15.79■□□□□ 0.12
CXCL1-201ENST00000395761 PTPRQQ9UMZ3 2332 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 TK2O00142 265 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 DSCR3O14972 297 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 OR1F1O43749 312 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 GFAPP14136 432 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 GNAZP19086 355 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 EPORP19235 508 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 AGXTP21549 392 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 GRK3P35626 688 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 RPS18P62269 152 aaKnown RBP15.78■□□□□ 0.12
CXCL1-201ENST00000395761 CYP4F2P78329 520 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 DCDP81605 110 aaKnown RBP15.78■□□□□ 0.12
CXCL1-201ENST00000395761 SLC9A5Q14940 896 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 FAM214AQ32MH5 1076 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 FAM69BQ5VUD6 431 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 YOD1Q5VVQ6 348 aaPredicted RBP15.78■□□□□ 0.12
CXCL1-201ENST00000395761 C16orf46Q6P387 395 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 FAM198BQ6UWH4 519 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 ARHGEF39Q8N4T4 335 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 PROKR1Q8TCW9 393 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.78■□□□□ 0.12
CXCL1-201ENST00000395761 TM4SF19Q96DZ7 209 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 THAP11Q96EK4 314 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 MOCOSQ96EN8 888 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 SLC45A3Q96JT2 553 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 SARGQ9BW04 601 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 CENPHQ9H3R5 247 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 SLC22A11Q9NSA0 550 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 MKS1Q9NXB0 559 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 TMEM216Q9P0N5 145 aa15.78■□□□□ 0.12
CXCL1-201ENST00000395761 MRPS2Q9Y399 296 aaKnown RBP15.78■□□□□ 0.12
CXCL1-201ENST00000395761 A0A1B0GX78 115 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 TRBC2A0A5B9 178 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 NKX2-8O15522 239 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 GSTA1P08263 222 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 C1GALT1C1LP0DN25 315 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 KRT4P19013 534 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 SCTRP47872 440 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 OR1D4P47884 311 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 ALDH18A1P54886 795 aaKnown RBP15.77■□□□□ 0.12
CXCL1-201ENST00000395761 REEP5Q00765 189 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 SETDB1Q15047 1291 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 PDK4Q16654 411 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 ATG9BQ674R7 924 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 ASPGQ86U10 573 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 SRRM1Q8IYB3 904 aaKnown RBP15.77■□□□□ 0.12
CXCL1-201ENST00000395761 GOLGA6L1Q8N7Z2 621 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 ENDOVQ8N8Q3 282 aaKnown RBP15.77■□□□□ 0.12
CXCL1-201ENST00000395761 SNRNP27Q8WVK2 155 aaKnown RBP15.77■□□□□ 0.12
CXCL1-201ENST00000395761 SLC13A3Q8WWT9 602 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 ATP6V1G3Q96LB4 118 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 DPH2Q9BQC3 489 aaPredicted RBP15.77■□□□□ 0.12
CXCL1-201ENST00000395761 MRPL57Q9BQC6 102 aaKnown RBP15.77■□□□□ 0.12
CXCL1-201ENST00000395761 AIF1LQ9BQI0 150 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 EFHD1Q9BUP0 239 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 CAPS2Q9BXY5 557 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 MRPL46Q9H2W6 279 aaKnown RBP15.77■□□□□ 0.12
CXCL1-201ENST00000395761 SSU72Q9NP77 194 aaKnown RBP15.77■□□□□ 0.12
CXCL1-201ENST00000395761 GEMIN8Q9NWZ8 242 aaKnown RBP15.77■□□□□ 0.12
CXCL1-201ENST00000395761 GPRC5BQ9NZH0 403 aa15.77■□□□□ 0.12
CXCL1-201ENST00000395761 DCDC2Q9UHG0 476 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms