RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 GSDMCQ9BYG8 508 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 DPY30Q9C005 99 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 PCBD2Q9H0N5 130 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 IL21RQ9HBE5 538 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 S100A14Q9HCY8 104 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 TSC22D4Q9Y3Q8 395 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 PCDH15Q96QU1 1955 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 C15orf38-AP3S2A0A0A6YYH1 394 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 FXYD1O00168 92 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 ACOT8O14734 319 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 IL6P05231 212 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 CELA2BP08218 269 aaPredicted RBP18.56■□□□□ 0.56
LMNB1-202ENST00000395354 AMD1P17707 334 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 XRCC1P18887 633 aaPredicted RBP18.56■□□□□ 0.56
LMNB1-202ENST00000395354 IDSP22304 550 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 ACTR1BP42025 376 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 CLCNKAP51800 687 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 CLNS1AP54105 237 aaKnown RBP18.56■□□□□ 0.56
LMNB1-202ENST00000395354 ATXN3P54252 364 aaPredicted RBP18.56■□□□□ 0.56
LMNB1-202ENST00000395354 CLDN8P56748 225 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 ACTR1AP61163 376 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 NFYCQ13952 458 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 FLOT2Q14254 428 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 TRIM25Q14258 630 aaKnown RBP18.56■□□□□ 0.56
LMNB1-202ENST00000395354 SF3A2Q15428 464 aaKnown RBP18.56■□□□□ 0.56
LMNB1-202ENST00000395354 HIST2H2ACQ16777 129 aaPredicted RBP18.56■□□□□ 0.56
LMNB1-202ENST00000395354 HIST2H2AA3Q6FI13 130 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 SLC30A9Q6PML9 568 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 ARPINQ7Z6K5 226 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 TAF8Q7Z7C8 310 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.56■□□□□ 0.56
LMNB1-202ENST00000395354 RAB42Q8N4Z0 105 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 OR2I1PQ8NGU4 316 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 SLC5A11Q8WWX8 675 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 UBE2E3Q969T4 207 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 VPS33AQ96AX1 596 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 OSGEPL1Q9H4B0 414 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 SEMA4GQ9NTN9 838 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 VPS29Q9UBQ0 182 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 PSMD13Q9UNM6 376 aa18.56■□□□□ 0.56
LMNB1-202ENST00000395354 RIF1Q5UIP0 2472 aaKnown RBP18.56■□□□□ 0.56
LMNB1-202ENST00000395354 LNP1A1A4G5 178 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 C9JVG2 144 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 AQP9O43315 295 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 LRP3O75074 770 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 TIGD2Q4W5G0 525 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 PRAMEF13Q5VWM6 474 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 NXPE4Q6UWF7 544 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 TMPRSS11BQ86T26 416 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 LAS2Q8IYD9 372 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 ZNF548Q8NEK5 533 aaPredicted RBP18.55■□□□□ 0.56
LMNB1-202ENST00000395354 OR7G3Q8NG95 312 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 CLMPQ9H6B4 373 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 UCKL1Q9NWZ5 548 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 FOXE1O00358 373 aaPredicted RBP18.55■□□□□ 0.56
LMNB1-202ENST00000395354 ANPEPP15144 967 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 SLC7A2P52569 658 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 NHLH1Q02575 133 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 CSRP2Q16527 193 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 PAGE3Q5JUK9 113 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 ZFP1Q6P2D0 407 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 SUSD1Q6UWL2 747 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 GKN2Q86XP6 184 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 SDR16C5Q8N3Y7 309 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 SLC25A45Q8N413 288 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 DNAJB8Q8NHS0 232 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 SLC26A7Q8TE54 656 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 ANKRD27Q96NW4 1050 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 RAB11FIP5Q9BXF6 653 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 MVB12BQ9H7P6 319 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 NMRK1Q9NWW6 199 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 TAAR2Q9P1P5 351 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 PACSIN3Q9UKS6 424 aa18.55■□□□□ 0.56
LMNB1-202ENST00000395354 RUVBL1Q9Y265 456 aaKnown RBP18.55■□□□□ 0.56
LMNB1-202ENST00000395354 TDRKHQ9Y2W6 561 aaKnown RBP18.55■□□□□ 0.56
LMNB1-202ENST00000395354 ARHGEF17Q96PE2 2063 aaPredicted RBP18.54■□□□□ 0.56
LMNB1-202ENST00000395354 PRORSD1PA6NEY8 169 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 YY2O15391 372 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 YKT6O15498 198 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 PRMT3O60678 531 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 ANP32DO95626 131 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 HSD17B1P14061 328 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 SLC6A2P23975 617 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 RPL10P27635 214 aaKnown RBP18.54■□□□□ 0.56
LMNB1-202ENST00000395354 EPHA8P29322 1005 aaPredicted RBP18.54■□□□□ 0.56
LMNB1-202ENST00000395354 MS4A2Q01362 244 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 PTGR1Q14914 329 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 SLC15A3Q8IY34 581 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 FAM46DQ8NEK8 389 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 SMPDL3AQ92484 453 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 APIPQ96GX9 242 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 C12orf66Q96MD2 445 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 INSM2Q96T92 566 aaPredicted RBP18.54■□□□□ 0.56
LMNB1-202ENST00000395354 PHOX2BQ99453 314 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 MENTQ9BUN1 341 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 PRDM8Q9NQV8 689 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 TBC1D29Q9UFV1 150 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 RAPGEFL1Q9UHV5 662 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 PPT2Q9UMR5 302 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 DOLKQ9UPQ8 538 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms