RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 ZNF473Q8WTR7 871 aaKnown RBP8.14□□□□□ -1.11
HERC4-203ENST00000395185 LCN9Q8WX39 176 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 PYCR2Q96C36 320 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 NAF1Q96HR8 494 aaKnown RBP8.14□□□□□ -1.11
HERC4-203ENST00000395185 TEFMQ96QE5 360 aaKnown RBP8.14□□□□□ -1.11
HERC4-203ENST00000395185 CD180Q99467 661 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 SARGQ9BW04 601 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 RAB11FIP5Q9BXF6 653 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 TRIM55Q9BYV6 548 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 RAB33BQ9H082 229 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 SRMSQ9H3Y6 488 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 TUBB1Q9H4B7 451 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 MID1IP1Q9NPA3 183 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 SEMA4BQ9NPR2 832 aaPredicted RBP8.14□□□□□ -1.11
HERC4-203ENST00000395185 EPHA6Q9UF33 1036 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 KLHL3Q9UH77 587 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 TRPS1Q9UHF7 1281 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 PLAGL1Q9UM63 463 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 KCNE2Q9Y6J6 123 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 USH1CQ9Y6N9 552 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 NCOR2Q9Y618 2525 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 SPTBN2O15020 2390 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 ANKRD12Q6UB98 2062 aa8.14□□□□□ -1.11
HERC4-203ENST00000395185 CDRT15L2A8MXV6 281 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 TMEM233B4DJY2 109 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 H0YIV9 168 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 AGRPO00253 132 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 BTN3A3O00478 584 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 AZIN1O14977 448 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 POLR1CO15160 346 aaPredicted RBP8.13□□□□□ -1.11
HERC4-203ENST00000395185 CASC3O15234 703 aaKnown RBP8.13□□□□□ -1.11
HERC4-203ENST00000395185 CCNT2O60583 730 aaKnown RBP8.13□□□□□ -1.11
HERC4-203ENST00000395185 WDR47O94967 919 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 OR4F21O95013 312 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 FKBP9O95302 570 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 CLDN9O95484 217 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 JUNP05412 331 aaKnown RBP8.13□□□□□ -1.11
HERC4-203ENST00000395185 PRR35P0CG20 571 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 HGFP14210 728 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 GNAZP19086 355 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 PEBP1P30086 187 aaKnown RBP8.13□□□□□ -1.11
HERC4-203ENST00000395185 SHMT2P34897 504 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 CAPZBP47756 277 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 IDH3AP50213 366 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 PDX1P52945 283 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 TBPL1P62380 186 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 ABATP80404 500 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 MC2RQ01718 297 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 CFHR1Q03591 330 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 PRDX1Q06830 199 aaKnown RBP8.13□□□□□ -1.11
HERC4-203ENST00000395185 DOC2AQ14183 400 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 C16orf72Q14CZ0 275 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 XKR7Q5GH72 579 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 TMTC4Q5T4D3 741 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 METTL21CQ5VZV1 264 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 ATG9BQ674R7 924 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 C19orf48Q6RUI8 117 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 NXPE4Q6UWF7 544 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 C6orf89Q6UWU4 347 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 CEACAM20Q6UY09 585 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 TRIM46Q7Z4K8 759 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 ARHGAP22Q7Z5H3 698 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 MILR1Q7Z6M3 343 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 AMIGO1Q86WK6 493 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 LAS2Q8IYD9 372 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 SYTL1Q8IYJ3 562 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 RAB42Q8N4Z0 105 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 LMNTD1Q8N9Z9 388 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 ZSCAN1Q8NBB4 408 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 PPFIBP2Q8ND30 876 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 OR4E2Q8NGC2 313 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 ACTRT2Q8TDY3 377 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 NEIL2Q969S2 332 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 SEC16BQ96JE7 1060 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 MAGEB10Q96LZ2 347 aaPredicted RBP8.13□□□□□ -1.11
HERC4-203ENST00000395185 CCT7Q99832 543 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 HAUS8Q9BT25 410 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 CCDC28BQ9BUN5 200 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 DDA1Q9BW61 102 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 SLC29A3Q9BZD2 475 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 PITHD1Q9GZP4 211 aaPredicted RBP8.13□□□□□ -1.11
HERC4-203ENST00000395185 NSRP1Q9H0G5 558 aaKnown RBP8.13□□□□□ -1.11
HERC4-203ENST00000395185 XKR8Q9H6D3 395 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 NT5DC2Q9H857 520 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 MEAF6Q9HAF1 191 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 ASCL3Q9NQ33 180 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 FBXO8Q9NRD0 319 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 CIDEBQ9UHD4 219 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 ZNF490Q9ULM2 529 aaPredicted RBP8.13□□□□□ -1.11
HERC4-203ENST00000395185 PPT2Q9UMR5 302 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 SH2B3Q9UQQ2 575 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 RNF11Q9Y3C5 154 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 PCDHGA3Q9Y5H0 932 aa8.13□□□□□ -1.11
HERC4-203ENST00000395185 IGKV1-8A0A0C4DH67 115 aa8.12□□□□□ -1.11
HERC4-203ENST00000395185 OR6C74A6NCV1 312 aa8.12□□□□□ -1.11
HERC4-203ENST00000395185 OR5K3A6NET4 321 aa8.12□□□□□ -1.11
HERC4-203ENST00000395185 STMND1H3BQB6 276 aa8.12□□□□□ -1.11
HERC4-203ENST00000395185 SDHDO14521 159 aa8.12□□□□□ -1.11
HERC4-203ENST00000395185 NDUFAB1O14561 156 aa8.12□□□□□ -1.11
HERC4-203ENST00000395185 TLX3O43711 291 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms