RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 ALG5Q9Y673 324 aa16.72■□□□□ 0.27
SIN3A-203ENST00000394949 SLC38A8A6NNN8 435 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 SLC1A7O00341 560 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 TACSTD2P09758 323 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 DGKGP49619 791 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 MLLT6P55198 1093 aaPredicted RBP16.71■□□□□ 0.27
SIN3A-203ENST00000394949 HSD17B12Q53GQ0 312 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 GARNL3Q5VVW2 1013 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 SHQ1Q6PI26 577 aaKnown RBP16.71■□□□□ 0.27
SIN3A-203ENST00000394949 NPAS3Q8IXF0 933 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 RTP4Q96DX8 246 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 POLE4Q9NR33 117 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 ENAMQ9NRM1 1142 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 ZCCHC3Q9NUD5 404 aaKnown RBP16.71■□□□□ 0.27
SIN3A-203ENST00000394949 CAPN14A8MX76 684 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 LOC730098B7Z3J9 87 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 OR2B3O76000 313 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 SLC35E2BP0CK96 405 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 CDK4P11802 303 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 HSD17B2P37059 387 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 STXBP1P61764 594 aaKnown RBP16.71■□□□□ 0.27
SIN3A-203ENST00000394949 CAP1Q01518 475 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 CGB2Q6NT52 195 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 PNCKQ6P2M8 343 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 ZCCHC12Q6PEW1 402 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 GET4Q7L5D6 327 aaPredicted RBP16.71■□□□□ 0.27
SIN3A-203ENST00000394949 OR13J1Q8NGT2 312 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 PKP4Q99569 1192 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 CDADC1Q9BWV3 514 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 SETD1AO15047 1707 aaKnown RBP16.71■□□□□ 0.27
SIN3A-203ENST00000394949 H7C2Y5 167 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 WNT9AO14904 365 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 EPCAMP16422 314 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 RYKP34925 604 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 KCNC4Q03721 635 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 ILF3Q12906 894 aaKnown RBP eCLIP16.71■□□□□ 0.27
SIN3A-203ENST00000394949 TIGD5Q53EQ6 642 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 TPGS2Q68CL5 300 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 GALNT13Q8IUC8 556 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 ZNF548Q8NEK5 533 aaPredicted RBP16.71■□□□□ 0.27
SIN3A-203ENST00000394949 ZMIZ2Q8NF64 920 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 FCRL3Q96P31 734 aaPredicted RBP16.71■□□□□ 0.27
SIN3A-203ENST00000394949 VRTNQ9H8Y1 702 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 ZDHHC4Q9NPG8 344 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 IFT46Q9NQC8 304 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 PAQR5Q9NXK6 330 aaPredicted RBP16.71■□□□□ 0.27
SIN3A-203ENST00000394949 UBQLN2Q9UHD9 624 aa16.71■□□□□ 0.27
SIN3A-203ENST00000394949 H3BMQ9 156 aa16.71■□□□□ 0.26
SIN3A-203ENST00000394949 OR1F1O43749 312 aa16.71■□□□□ 0.26
SIN3A-203ENST00000394949 AGR2O95994 175 aa16.71■□□□□ 0.26
SIN3A-203ENST00000394949 CMPK1P30085 196 aa16.71■□□□□ 0.26
SIN3A-203ENST00000394949 MAP2K4P45985 399 aa16.71■□□□□ 0.26
SIN3A-203ENST00000394949 C10orf62Q5T681 223 aaPredicted RBP16.71■□□□□ 0.26
SIN3A-203ENST00000394949 SLC30A6Q6NXT4 461 aa16.71■□□□□ 0.26
SIN3A-203ENST00000394949 PM20D2Q8IYS1 436 aa16.71■□□□□ 0.26
SIN3A-203ENST00000394949 CADM2Q8N3J6 435 aa16.71■□□□□ 0.26
SIN3A-203ENST00000394949 C1orf52Q8N6N3 182 aaKnown RBP16.71■□□□□ 0.26
SIN3A-203ENST00000394949 ING5Q8WYH8 240 aa16.71■□□□□ 0.26
SIN3A-203ENST00000394949 COG8Q96MW5 612 aa16.71■□□□□ 0.26
SIN3A-203ENST00000394949 SMOC2Q9H3U7 446 aa16.71■□□□□ 0.26
SIN3A-203ENST00000394949 ELAC1Q9H777 363 aaKnown RBP16.71■□□□□ 0.26
SIN3A-203ENST00000394949 ZNF69Q9UC07 566 aa16.71■□□□□ 0.26
SIN3A-203ENST00000394949 ZNF639Q9UID6 485 aa16.71■□□□□ 0.26
SIN3A-203ENST00000394949 HTR3EA5X5Y0 456 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 UNCXA6NJT0 531 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 PLD2O14939 933 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 DIRAS1O95057 198 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 RLN2P04090 185 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 C8AP07357 584 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 ANXA3P12429 323 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 HNRNPA0Q13151 305 aaKnown RBP16.7■□□□□ 0.26
SIN3A-203ENST00000394949 NUDT13Q86X67 352 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 ZNF514Q96K75 400 aaPredicted RBP16.7■□□□□ 0.26
SIN3A-203ENST00000394949 CYP2S1Q96SQ9 504 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 LPIN3Q9BQK8 851 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 SOX17Q9H6I2 414 aaPredicted RBP16.7■□□□□ 0.26
SIN3A-203ENST00000394949 MS4A12Q9NXJ0 267 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 GIMAP2Q9UG22 337 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 PCDHGB5Q9Y5G0 923 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 TLX2O43763 284 aaPredicted RBP16.7■□□□□ 0.26
SIN3A-203ENST00000394949 ACVR2AP27037 513 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 PSMD8P48556 350 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 CDH11P55287 796 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 ZNF155Q12901 538 aaPredicted RBP16.7■□□□□ 0.26
SIN3A-203ENST00000394949 KREMEN2Q8NCW0 462 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 TTLQ8NG68 377 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 ACDQ96AP0 544 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 GPER1Q99527 375 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 SPATA9Q9BWV2 254 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 DUS2Q9NX74 493 aaKnown RBP16.7■□□□□ 0.26
SIN3A-203ENST00000394949 B3GNT3Q9Y2A9 372 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 MYH10P35580 1976 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 CSF2P04141 144 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 HK1P19367 917 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 OLIG2Q13516 323 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 PRAMEF17Q5VTA0 474 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 SLC36A4Q6YBV0 504 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 RPS27LQ71UM5 84 aaKnown RBP16.7■□□□□ 0.26
SIN3A-203ENST00000394949 FATE1Q969F0 183 aa16.7■□□□□ 0.26
SIN3A-203ENST00000394949 NEUROD4Q9HD90 331 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms