RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PCOLCEQ15113 449 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 RBBP7Q16576 425 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 TUBB8Q3ZCM7 444 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 CATSPEREQ5SY80 951 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 GARNL3Q5VVW2 1013 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 FAAH2Q6GMR7 532 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 TMEM214Q6NUQ4 689 aaKnown RBP8.39□□□□□ -1.07
ATG4A-205ENST00000394892 TMEM205Q6UW68 189 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 SYDE1Q6ZW31 735 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-205ENST00000394892 PCGF5Q86SE9 256 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 SLC26A11Q86WA9 606 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 ZC3HC1Q86WB0 502 aaKnown RBP8.39□□□□□ -1.07
ATG4A-205ENST00000394892 IQCKQ8N0W5 287 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 PDIK1LQ8N165 341 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 GPATCH11Q8N954 259 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 FBXO36Q8NEA4 188 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 ABHD11Q8NFV4 315 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 OR4K1Q8NGD4 311 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 MCOLN3Q8TDD5 553 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 MVB12AQ96EY5 273 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 MMABQ96EY8 250 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-205ENST00000394892 PDLIM5Q96HC4 596 aaKnown RBP8.39□□□□□ -1.07
ATG4A-205ENST00000394892 IMMP1LQ96LU5 166 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 C5orf34Q96MH7 638 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 WDR77Q9BQA1 342 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-205ENST00000394892 NAT9Q9BTE0 207 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 ZNF160Q9HCG1 818 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 CCDC177Q9NQR7 707 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-205ENST00000394892 NXT1Q9UKK6 140 aaKnown RBP8.39□□□□□ -1.07
ATG4A-205ENST00000394892 SLC5A6Q9Y289 635 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 B3GNT3Q9Y2A9 372 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 SHANK1Q9Y566 2161 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 PRRC2CQ9Y520 2896 aaKnown RBP8.39□□□□□ -1.07
ATG4A-205ENST00000394892 IGHV1-45A0A0A0MS14 117 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 IGHV3-20A0A0C4DH32 117 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 ZNF839A8K0R7 811 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 SGK494L7N484 410 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 E2F3O00716 465 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 RAD51CO43502 376 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 PRAMEF4O60810 478 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 CCNDBP1O95273 360 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 TBX6O95947 436 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-205ENST00000394892 HPP00738 406 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 IGHEP01854 428 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 ALPPP05187 535 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 PRR35P0CG20 571 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 ACPPP15309 386 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 IL1RNP18510 177 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 DCTP40126 519 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 EMP2P54851 167 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 ARL4CP56559 192 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 GPX6P59796 221 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 OCA2Q04671 838 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 SRSF11Q05519 484 aaKnown RBP8.38□□□□□ -1.07
ATG4A-205ENST00000394892 MGAT5Q09328 741 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 HYAL2Q12891 473 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 PDIA2Q13087 525 aaKnown RBP8.38□□□□□ -1.07
ATG4A-205ENST00000394892 SP140Q13342 867 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 FAM53BQ14153 422 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 NAA30Q147X3 362 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-205ENST00000394892 NR6A1Q15406 480 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 UBAP2Q5T6F2 1119 aaKnown RBP8.38□□□□□ -1.07
ATG4A-205ENST00000394892 THEMIS2Q5TEJ8 643 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 PRAMEF9Q5VWM5 478 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 B3GNTL1Q67FW5 361 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-205ENST00000394892 DUPD1Q68J44 220 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 ZNF787Q6DD87 383 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 LCTLQ6UWM7 567 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 LANCL3Q6ZV70 420 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 ADCK2Q7Z695 626 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 SLC34A3Q8N130 599 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 AFAP1L2Q8N4X5 818 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 ANKRD53Q8N9V6 530 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 OR5T3Q8NGG3 340 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 ALKBH8Q96BT7 664 aaKnown RBP8.38□□□□□ -1.07
ATG4A-205ENST00000394892 FBXL8Q96CD0 374 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 LRRC39Q96DD0 335 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 SNF8Q96H20 258 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 THOC3Q96J01 351 aaKnown RBP8.38□□□□□ -1.07
ATG4A-205ENST00000394892 SARGQ9BW04 601 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 UNKQ9C0B0 810 aaKnown RBP8.38□□□□□ -1.07
ATG4A-205ENST00000394892 VN1R1Q9GZP7 353 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 LHPPQ9H008 270 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 DRC3Q9H069 523 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 LANCL2Q9NS86 450 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 PLA2G3Q9NZ20 509 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 HCN3Q9P1Z3 774 aa8.38□□□□□ -1.07
ATG4A-205ENST00000394892 NOVA2Q9UNW9 492 aaKnown RBP8.38□□□□□ -1.07
ATG4A-205ENST00000394892 MTO1Q9Y2Z2 717 aaKnown RBP8.38□□□□□ -1.07
ATG4A-205ENST00000394892 FAM95CA0A1B0GW59 222 aa8.37□□□□□ -1.07
ATG4A-205ENST00000394892 NPEPPSL1A6NEC2 478 aa8.37□□□□□ -1.07
ATG4A-205ENST00000394892 ZNF860A6NHJ4 632 aa8.37□□□□□ -1.07
ATG4A-205ENST00000394892 EFCAB8A8MWE9 144 aa8.37□□□□□ -1.07
ATG4A-205ENST00000394892 CCDC188H7C350 402 aa8.37□□□□□ -1.07
ATG4A-205ENST00000394892 MAN1A2O60476 641 aa8.37□□□□□ -1.07
ATG4A-205ENST00000394892 RDH16O75452 317 aa8.37□□□□□ -1.07
ATG4A-205ENST00000394892 NSA2O95478 260 aaKnown RBP8.37□□□□□ -1.07
ATG4A-205ENST00000394892 GUCA1CO95843 209 aa8.37□□□□□ -1.07
ATG4A-205ENST00000394892 ITGAMP11215 1152 aa8.37□□□□□ -1.07
ATG4A-205ENST00000394892 ZNF37AP17032 561 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms