RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 ADAMTS4O75173 837 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 GLP2RO95838 553 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 SERPINA1P01009 418 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 HLA-DPA1P20036 260 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 IHHQ14623 411 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 ZMAT1Q5H9K5 638 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 GARNL3Q5VVW2 1013 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 MRNIPQ6NTE8 343 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 LDB1Q86U70 411 aaPredicted RBP18.26■□□□□ 0.51
HOXC6-202ENST00000394331 ATCAYQ86WG3 371 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 TMC8Q8IU68 726 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 GGHQ92820 318 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 PRRG3Q9BZD7 231 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 PCDHGA6Q9Y5G7 932 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 TDRD15B5MCY1 1934 aaKnown RBP18.26■□□□□ 0.51
HOXC6-202ENST00000394331 KERAO60938 352 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 EOMESO95936 686 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 EPOP01588 193 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 HOXD4P09016 255 aaPredicted RBP18.26■□□□□ 0.51
HOXC6-202ENST00000394331 KIR2DL3P43628 341 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 GPR15P49685 360 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 YBEYP58557 167 aaPredicted RBP18.26■□□□□ 0.51
HOXC6-202ENST00000394331 SNRPD2P62316 118 aaKnown RBP18.26■□□□□ 0.51
HOXC6-202ENST00000394331 DSC1Q08554 894 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 TATDN3Q17R31 274 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 TEX261Q6UWH6 196 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 ARSKQ6UWY0 536 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 GDPGP1Q6ZNW5 385 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 ANKS3Q6ZW76 656 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 CDH24Q86UP0 819 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 ZNF280BQ86YH2 543 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 OR52K2Q8NGK3 314 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 CHTF18Q8WVB6 975 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 EXT2Q93063 718 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 IGSF8Q969P0 613 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 THUMPD3Q9BV44 507 aaKnown RBP18.26■□□□□ 0.51
HOXC6-202ENST00000394331 POLR1EQ9GZS1 481 aaKnown RBP18.26■□□□□ 0.51
HOXC6-202ENST00000394331 U3KQ87 197 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 ANKRD12Q6UB98 2062 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 KCNJ13O60928 360 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 FGF1P05230 155 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 STK11Q15831 433 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 KCNA10Q16322 511 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 HKDC1Q2TB90 917 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 RUNDC3AQ59EK9 446 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 GPAT4Q86UL3 456 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 ZSWIM9Q86XI8 627 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 TRIM48Q8IWZ4 208 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 OR8H1Q8NGG4 311 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 GPR150Q8NGU9 434 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 SLC13A3Q8WWT9 602 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 TBATAQ96M53 351 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 TBCDQ9BTW9 1192 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 TNKS2Q9H2K2 1166 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 TMEM39AQ9NV64 488 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 CRYL1Q9Y2S2 319 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 TNPO3Q9Y5L0 923 aaKnown RBP18.25■□□□□ 0.51
HOXC6-202ENST00000394331 CCL22O00626 93 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 RFPL3O75679 317 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 ZNF37AP17032 561 aaPredicted RBP18.25■□□□□ 0.51
HOXC6-202ENST00000394331 GRK4P32298 578 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 SERINC3Q13530 473 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 PGBD5Q8N414 524 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 DNAJB8Q8NHS0 232 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 ENKURQ8TC29 256 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 RPRD1AQ96P16 312 aaPredicted RBP18.25■□□□□ 0.51
HOXC6-202ENST00000394331 SEMA3CQ99985 751 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 MARCH2Q9P0N8 246 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 SAMD4AQ9UPU9 718 aaKnown RBP18.25■□□□□ 0.51
HOXC6-202ENST00000394331 SNX8Q9Y5X2 465 aa18.25■□□□□ 0.51
HOXC6-202ENST00000394331 OR51F1A6NGY5 319 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 DPM1O60762 260 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 CYP7B1O75881 506 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 C10orf62Q5T681 223 aaPredicted RBP18.24■□□□□ 0.51
HOXC6-202ENST00000394331 SAXO2Q658L1 398 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 ADGRG3Q86Y34 549 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 TTLQ8NG68 377 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 FBXO32Q969P5 355 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 SEMA4BQ9NPR2 832 aaPredicted RBP18.24■□□□□ 0.51
HOXC6-202ENST00000394331 CMAHPQ9Y471 501 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 KCTD3Q9Y597 815 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 ALG5Q9Y673 324 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 A8MX80 341 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 B4GALT3O60512 393 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 PTHP01270 115 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 CSF3P09919 207 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 CTGFP29279 349 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 EPHA2P29317 976 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 OR1G1P47890 313 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 MAPKAPK2P49137 400 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 KCNQ1P51787 676 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 IL1RL1Q01638 556 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 RHAGQ02094 409 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 LEXMQ3ZCV2 418 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 PLET1Q6UQ28 207 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 PIM3Q86V86 326 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 MIB1Q86YT6 1006 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 FBXO39Q8N4B4 442 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 PNPLA1Q8N8W4 532 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 DUSP18Q8NEJ0 188 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms