RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 MINDY4Q4G0A6 757 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 RPL13AP3Q6NVV1 102 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 ZPBP2Q6X784 338 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 CARM1Q86X55 608 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 OR10G2Q8NGC3 310 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 HAS2Q92819 552 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 ADAM2Q99965 735 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 FN3KRPQ9HA64 309 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 KIF25Q9UIL4 384 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 DFNA5O60443 496 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 H1F0P07305 194 aaKnown RBP13.07□□□□□ -0.32
USP49-203ENST00000394253 LASP1Q14847 261 aaKnown RBP13.07□□□□□ -0.32
USP49-203ENST00000394253 ATG9BQ674R7 924 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 CCDC71LQ8N9Z2 235 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 CHST7Q9NS84 486 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 MKS1Q9NXB0 559 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 SLC7A11Q9UPY5 501 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 A0A1W2PQ67 120 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 PROM1O43490 865 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 MT-ND1P03886 318 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 PRKCGP05129 697 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 TPT1P13693 172 aaKnown RBP13.07□□□□□ -0.32
USP49-203ENST00000394253 CDNFQ49AH0 187 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 PPP1R26Q5T8A7 1209 aaPredicted RBP13.07□□□□□ -0.32
USP49-203ENST00000394253 KIAA1614Q5VZ46 1190 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 CACUL1Q86Y37 369 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 TMEM109Q9BVC6 243 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 ATG5Q9H1Y0 275 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 OR2AG2A6NM03 316 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 DAG1Q14118 895 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 SLC36A4Q6YBV0 504 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 RDH10Q8IZV5 341 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 ZBTB2Q8N680 514 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 FAM86B1Q8N7N1 296 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 DPEP2Q9H4A9 486 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 MPSTP25325 297 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 CTNNB1P35222 781 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 SOX9P48436 509 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 GLT8D1Q68CQ7 371 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 DEFB106AQ8N104 65 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 KCT2Q8NC54 265 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 BIRC8Q96P09 236 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 GAL3ST4Q96RP7 486 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 ORAI2Q96SN7 254 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 TBX5Q99593 518 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 MEAF6Q9HAF1 191 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 SSU72Q9NP77 194 aaKnown RBP13.07□□□□□ -0.32
USP49-203ENST00000394253 UFSP2Q9NUQ7 469 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 IGSF1Q8N6C5 1336 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 PCNX2A6NKB5 2137 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 EI24O14681 340 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 PRKYO43930 277 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 EVI2BP34910 448 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 ETV1P50549 477 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 HTRA4P83105 476 aaPredicted RBP13.07□□□□□ -0.32
USP49-203ENST00000394253 BPIFA1Q9NP55 256 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 ZNF701Q9NV72 531 aaPredicted RBP13.07□□□□□ -0.32
USP49-203ENST00000394253 SMPD4Q9NXE4 827 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 AGO1Q9UL18 857 aaKnown RBP13.07□□□□□ -0.32
USP49-203ENST00000394253 TXNL1O43396 289 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 SHOX2O60902 331 aaPredicted RBP13.07□□□□□ -0.32
USP49-203ENST00000394253 SLC27A1Q6PCB7 646 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 PROKR1Q8TCW9 393 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 GPRC5CQ9NQ84 441 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 CCDC85CA6NKD9 419 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 E7ESA3 106 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 BRINP1O60477 761 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 SC5DO75845 299 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 ACTL6BO94805 426 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 ZBTB7AO95365 584 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 PTTG1O95997 202 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 ACTC1P68032 377 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 ACTA1P68133 377 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 CACNG1Q06432 222 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 COX15Q7KZN9 410 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 A0A0U1RQK1 487 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 PRPH2P23942 346 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 HHATLQ9HCP6 504 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 TP53TG5Q9Y2B4 290 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 CYB5BO43169 146 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 RPP40O75818 363 aaKnown RBP13.06□□□□□ -0.32
USP49-203ENST00000394253 ZDHHC11BP0C7U3 371 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 HABP2Q14520 560 aaPredicted RBP13.06□□□□□ -0.32
USP49-203ENST00000394253 KHDC1Q4VXA5 237 aaKnown RBP13.06□□□□□ -0.32
USP49-203ENST00000394253 PIGGQ5H8A4 983 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 SLC39A4Q6P5W5 647 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 FIGNL1Q6PIW4 674 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 USP49Q70CQ1 688 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 MTMR9Q96QG7 549 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 ZNF436Q9C0F3 470 aaPredicted RBP13.06□□□□□ -0.32
USP49-203ENST00000394253 WDR6Q9NNW5 1121 aaKnown RBP13.06□□□□□ -0.32
USP49-203ENST00000394253 ACTR10Q9NZ32 417 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 J3QLW9 94 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 LYPLA1O75608 230 aaPredicted RBP13.06□□□□□ -0.32
USP49-203ENST00000394253 SERPINA7P05543 415 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 ZNF19P17023 458 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 RPIAP49247 311 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 SGCBQ16585 318 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 SYNE4Q8N205 404 aa13.06□□□□□ -0.32
USP49-203ENST00000394253 SEMA6DQ8NFY4 1073 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms