RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 HORMAD1Q86X24 394 aa10.56□□□□□ -0.72
CASP3-202ENST00000393585 MICU2Q8IYU8 434 aa10.56□□□□□ -0.72
CASP3-202ENST00000393585 MARVELD2Q8N4S9 558 aa10.56□□□□□ -0.72
CASP3-202ENST00000393585 WDR48Q8TAF3 677 aa10.56□□□□□ -0.72
CASP3-202ENST00000393585 PNPT1Q8TCS8 783 aaKnown RBP10.56□□□□□ -0.72
CASP3-202ENST00000393585 NCLNQ969V3 563 aa10.56□□□□□ -0.72
CASP3-202ENST00000393585 SIPA1Q96FS4 1042 aa10.56□□□□□ -0.72
CASP3-202ENST00000393585 CENPNQ96H22 339 aaPredicted RBP10.56□□□□□ -0.72
CASP3-202ENST00000393585 POM121Q96HA1 1249 aa10.56□□□□□ -0.72
CASP3-202ENST00000393585 CCDC115Q96NT0 180 aa10.56□□□□□ -0.72
CASP3-202ENST00000393585 INSM2Q96T92 566 aaPredicted RBP10.56□□□□□ -0.72
CASP3-202ENST00000393585 MENTQ9BUN1 341 aa10.56□□□□□ -0.72
CASP3-202ENST00000393585 IMP3Q9NV31 184 aaKnown RBP10.56□□□□□ -0.72
CASP3-202ENST00000393585 LIMD1Q9UGP4 676 aa10.56□□□□□ -0.72
CASP3-202ENST00000393585 SUFUQ9UMX1 484 aa10.56□□□□□ -0.72
CASP3-202ENST00000393585 CA5BQ9Y2D0 317 aa10.56□□□□□ -0.72
CASP3-202ENST00000393585 MYOCOSA0A1B0GUC4 107 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 OR52A4PA6NMU1 304 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 CXCR6O00574 342 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 HSPA13P48723 471 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 CLDN2P57739 230 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 CYP4F2P78329 520 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 RBBP5Q15291 538 aaKnown RBP10.55□□□□□ -0.72
CASP3-202ENST00000393585 MLF2Q15773 248 aaPredicted RBP10.55□□□□□ -0.72
CASP3-202ENST00000393585 NKG7Q16617 165 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 DUOXA1Q1HG43 343 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 OR52E8Q6IFG1 317 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 KIAA1161Q6NSJ0 714 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 TMIGD1Q6UXZ0 262 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 TBC1D21Q8IYX1 336 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 PAPD5Q8NDF8 572 aaKnown RBP10.55□□□□□ -0.72
CASP3-202ENST00000393585 OR8J2Q8NGG1 315 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 FAM162AQ96A26 154 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 FERD3LQ96RJ6 166 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 DUSP26Q9BV47 211 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 SORBS1Q9BX66 1292 aaKnown RBP10.55□□□□□ -0.72
CASP3-202ENST00000393585 TRIT1Q9H3H1 467 aaKnown RBP10.55□□□□□ -0.72
CASP3-202ENST00000393585 EHD1Q9H4M9 534 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 XKR8Q9H6D3 395 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 SH3BP4Q9P0V3 963 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 UTS2RQ9UKP6 389 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 GPSM3Q9Y4H4 160 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 DNMT3AQ9Y6K1 912 aaPredicted RBP10.55□□□□□ -0.72
CASP3-202ENST00000393585 MYO10Q9HD67 2058 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 PRAMEF33A0A0G2JMD5 474 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 RNF103-CHMP3A0A140T963 221 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 POM121BA6NF01 834 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 PRMT3O60678 531 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 RPN2P04844 631 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 ERGP11308 486 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 GZMMP51124 257 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 CHN2P52757 468 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 MC1RQ01726 317 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 ZNF385BQ569K4 471 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 CAPRIN2Q6IMN6 1127 aaKnown RBP10.55□□□□□ -0.72
CASP3-202ENST00000393585 PPP4R4Q6NUP7 873 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 VN1R5Q7Z5H4 357 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 C17orf64Q86WR6 236 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 CALHM3Q86XJ0 350 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 FAM129CQ86XR2 697 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 CLEC4FQ8N1N0 589 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 LINC01555Q8NAE3 123 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 OR10Q1Q8NGQ4 319 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 DNAJB8Q8NHS0 232 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 SETD7Q8WTS6 366 aaKnown RBP10.55□□□□□ -0.72
CASP3-202ENST00000393585 FAM131CQ96AQ9 280 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 VPS50Q96JG6 964 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 APOOQ9BUR5 198 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 GORASP2Q9H8Y8 452 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 EXO1Q9UQ84 846 aaKnown RBP10.55□□□□□ -0.72
CASP3-202ENST00000393585 MTCH2Q9Y6C9 303 aa10.55□□□□□ -0.72
CASP3-202ENST00000393585 FEZF1A0PJY2 475 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 C2CD4DB7Z1M9 353 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 H0Y8X5 98 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 CLIC1O00299 241 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 FOXE1O00358 373 aaPredicted RBP10.54□□□□□ -0.72
CASP3-202ENST00000393585 LINGO3P0C6S8 592 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 FCGR1AP12314 374 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 ENGP17813 658 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 CD72P21854 359 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 IDSP22304 550 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 ASMTP46597 345 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 TFF2Q03403 129 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 CLCA4Q14CN2 919 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 CPTPQ5TA50 214 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 KIAA1324Q6UXG2 1013 aaKnown RBP10.54□□□□□ -0.72
CASP3-202ENST00000393585 MSANTD1Q6ZTZ1 278 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 RPLP0P6Q8NHW5 317 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 NETO1Q8TDF5 533 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 SNX19Q92543 992 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 ABHD8Q96I13 439 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 METTL2AQ96IZ6 378 aaKnown RBP10.54□□□□□ -0.72
CASP3-202ENST00000393585 HAUS8Q9BT25 410 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 BTBD1Q9H0C5 482 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 FGF22Q9HCT0 170 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 FAM120CQ9NX05 1096 aaKnown RBP10.54□□□□□ -0.72
CASP3-202ENST00000393585 USP34Q70CQ2 3546 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 HEATR5BQ9P2D3 2071 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 A0A1W2PPV9 198 aa10.54□□□□□ -0.72
CASP3-202ENST00000393585 PDZK1P1A8MUH7 402 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms