RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CREG1O75629 220 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 RECKO95980 971 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 CAPN1P07384 714 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 ATXN8OSP0DMR3 200 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 SLCO1A2P46721 670 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 PDK4Q16654 411 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 NDUFA9Q16795 377 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 PFKFB4Q16877 469 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 PRMT9Q6P2P2 845 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 C16orf46Q6P387 395 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 FAM198BQ6UWH4 519 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 SLCO4C1Q6ZQN7 724 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 LRRC70Q7Z2Q7 622 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 VN1R4Q7Z5H5 301 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 ASPGQ86U10 573 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 LCA5Q86VQ0 697 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 ENDOVQ8N8Q3 282 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 SLC13A3Q8WWT9 602 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 RUFY1Q96T51 708 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 MRPL57Q9BQC6 102 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 ACTL8Q9H568 366 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 CPSF2Q9P2I0 782 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 OPTCQ9UBM4 332 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 TMCO1Q9UM00 188 aa18.11■□□□□ 0.49
PDLIM7-204ENST00000393546 SMIM23A6NLE4 172 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 K7EPI3 171 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 KLK8O60259 260 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 SMIM24O75264 130 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 CDH16O75309 829 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 ONECUT2O95948 504 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 NUDT17P0C025 328 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 KRT15P19012 456 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 VARSP26640 1264 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 AGTR2P50052 363 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 ALDH18A1P54886 795 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 REEP5Q00765 189 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 IFFO1Q0D2I5 559 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 SETDB1Q15047 1291 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 NCF4Q15080 339 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 RASA2Q15283 850 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 RBBP5Q15291 538 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 CRTC2Q53ET0 693 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 ATG9BQ674R7 924 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 SYVN1Q86TM6 617 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 ZNF740Q8NDX6 193 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 UBTD2Q8WUN7 234 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 TM4SF19Q96DZ7 209 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 MVB12AQ96EY5 273 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 C10orf90Q96M02 699 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 MRPL46Q9H2W6 279 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 ZNF304Q9HCX3 659 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 PADI2Q9Y2J8 665 aa18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 TNPO3Q9Y5L0 923 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-204ENST00000393546 TLDC2A0PJX2 215 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 P2RX6O15547 441 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 STATHP02808 62 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 SLC35G6P0C7Q6 338 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 PRKAR1AP10644 381 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 PYGBP11216 843 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 AHRP35869 848 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 SCTRP47872 440 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 OR1D4P47884 311 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 RPS18P62269 152 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 CYP4F2P78329 520 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 FAM53BQ14153 422 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 ERV3-1Q14264 604 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 NAA30Q147X3 362 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 SLC9A5Q14940 896 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 OVCH1Q7RTY7 1134 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 KRT78Q8N1N4 520 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 EPS8L3Q8TE67 593 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 MZB1Q8WU39 189 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 COL26A1Q96A83 441 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 CATSPER2Q96P56 530 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 PITHD1Q9GZP4 211 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 SPNS1Q9H2V7 528 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 EHD1Q9H4M9 534 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 XPR1Q9UBH6 696 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 ZFP69BQ9UJL9 534 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 TCFL5Q9UL49 500 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 ANGPTL3Q9Y5C1 460 aa18.09■□□□□ 0.49
PDLIM7-204ENST00000393546 FER1L5A0AVI2 2057 aa18.08■□□□□ 0.49
PDLIM7-204ENST00000393546 A0A1W2PPM1 405 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 GOLGA8RI6L899 631 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 PRPF4O43172 522 aaKnown RBP eCLIP18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 MED26O95402 600 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 ALBP02768 609 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 SERPIND1P05546 499 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 GSTA1P08263 222 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 EPB42P16452 691 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 ITGAXP20702 1163 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 RHDQ02161 417 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 IRF8Q02556 426 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 CDC20Q12834 499 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 LAPTM5Q13571 262 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 PWP1Q13610 501 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 SLBPQ14493 270 aaKnown RBP eCLIP18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 XKR6Q5GH73 641 aa18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 METTL2BQ6P1Q9 378 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-204ENST00000393546 MREGQ8N565 214 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms