RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 RHBDL2Q9NX52 303 aa11.88□□□□□ -0.51
RFC5-201ENST00000392542 IL36AQ9UHA7 158 aa11.88□□□□□ -0.51
RFC5-201ENST00000392542 CORO2BQ9UQ03 480 aa11.88□□□□□ -0.51
RFC5-201ENST00000392542 TPRKBQ9Y3C4 175 aa11.88□□□□□ -0.51
RFC5-201ENST00000392542 SAMHD1Q9Y3Z3 626 aaKnown RBP11.88□□□□□ -0.51
RFC5-201ENST00000392542 GMPPBQ9Y5P6 360 aa11.88□□□□□ -0.51
RFC5-201ENST00000392542 C1orf226A1L170 272 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 BCAS1O75363 584 aaPredicted RBP11.87□□□□□ -0.51
RFC5-201ENST00000392542 JRKO75564 520 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 CLPXO76031 633 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 SLC16A8O95907 504 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 ANXA4P09525 319 aaPredicted RBP11.87□□□□□ -0.51
RFC5-201ENST00000392542 CSF2RAP15509 400 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 IDSP22304 550 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 FMO3P31513 532 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 BMXP51813 675 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 EMX1Q04741 257 aaPredicted RBP11.87□□□□□ -0.51
RFC5-201ENST00000392542 TMEM115Q12893 351 aaPredicted RBP11.87□□□□□ -0.51
RFC5-201ENST00000392542 E2F2Q14209 437 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 SPCS2Q15005 226 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 ZNF77Q15935 545 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 HKDC1Q2TB90 917 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 ARHGAP15Q53QZ3 475 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 SPIN4Q56A73 249 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 ZNF805Q5CZA5 627 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 ANXA8L1Q5VT79 327 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 PDE12Q6L8Q7 609 aaKnown RBP11.87□□□□□ -0.51
RFC5-201ENST00000392542 NPAS3Q8IXF0 933 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 NAT16Q8N8M0 369 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 TTC29Q8NA56 475 aaPredicted RBP11.87□□□□□ -0.51
RFC5-201ENST00000392542 SMYD1Q8NB12 490 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 VPS37AQ8NEZ2 397 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 OR7G3Q8NG95 312 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 ZFP90Q8TF47 636 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 CHTF18Q8WVB6 975 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 PPP1R14BQ96C90 147 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 COQ8BQ96D53 544 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 FOPNLQ96NB1 174 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 APOL4Q9BPW4 351 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 DUSP21Q9H596 190 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 REEP1Q9H902 201 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 TBC1D14Q9P2M4 693 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 DKK3Q9UBP4 350 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 FZD4Q9ULV1 537 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 DPM1O60762 260 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 XYLBO75191 536 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 SH3BGRLO75368 114 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 FGF19O95750 216 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 NUDT7P0C024 238 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 LINC00271P0C7V0 271 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 HOXA9P31269 272 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 TIA1P31483 386 aaKnown RBP eCLIP11.87□□□□□ -0.51
RFC5-201ENST00000392542 MMP12P39900 470 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 PNLIPRP1P54315 467 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 LAIR1Q6GTX8 287 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 TMEM220Q6QAJ8 160 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 ZBTB46Q86UZ6 589 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 KLHL23Q8NBE8 558 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 HUS1BQ8NHY5 278 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 AP2M1Q96CW1 435 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 MTG2Q9H4K7 406 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 PRM3Q9NNZ6 103 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 PALMDQ9NP74 551 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 SCN3BQ9NY72 215 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 KIF17Q9P2E2 1029 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 ERVK-18Q9QC07 812 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 NDRG4Q9ULP0 352 aaKnown RBP11.87□□□□□ -0.51
RFC5-201ENST00000392542 AP1M2Q9Y6Q5 423 aa11.87□□□□□ -0.51
RFC5-201ENST00000392542 MGAT4DA6NG13 374 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 ZBTB11O95625 1053 aaPredicted RBP11.86□□□□□ -0.51
RFC5-201ENST00000392542 C9P02748 559 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 ELFN1P0C7U0 828 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 ITGB8P26012 769 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 RPS13P62277 151 aaKnown RBP11.86□□□□□ -0.51
RFC5-201ENST00000392542 SLC35A2P78381 396 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 GAB1Q13480 694 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 NPTX1Q15818 432 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 IQCCQ4KMZ1 466 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 GALNT18Q6P9A2 607 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 LIPIQ6XZB0 460 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 GIPC3Q8TF64 312 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 TRUB1Q8WWH5 349 aaKnown RBP11.86□□□□□ -0.51
RFC5-201ENST00000392542 BCL7BQ9BQE9 202 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 KRT84Q9NSB2 600 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 THUMPD1Q9NXG2 353 aaKnown RBP11.86□□□□□ -0.51
RFC5-201ENST00000392542 MARK1Q9P0L2 795 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 VPS4AQ9UN37 437 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 WNT6Q9Y6F9 365 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 KCNE2Q9Y6J6 123 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 ABCB1P08183 1280 aaPredicted RBP11.86□□□□□ -0.51
RFC5-201ENST00000392542 SYN1P17600 705 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 PTPN2P17706 415 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 NR4A1P22736 598 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 PDHA2P29803 388 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 PBLDP30039 288 aaPredicted RBP11.86□□□□□ -0.51
RFC5-201ENST00000392542 PCGF2P35227 344 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 MLLT10P55197 1068 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 RAB15P59190 212 aa11.86□□□□□ -0.51
RFC5-201ENST00000392542 MAD2L1BPQ15013 274 aaPredicted RBP11.86□□□□□ -0.51
RFC5-201ENST00000392542 RGNQ15493 299 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms