RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 ARRDC3Q96B67 414 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 PIK3IP1Q96FE7 263 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 C10orf90Q96M02 699 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 MYADMQ96S97 322 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 MAGEB5Q9BZ81 275 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 PUS7LQ9H0K6 701 aaKnown RBP-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 SPNS1Q9H2V7 528 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 DCLRE1BQ9H816 532 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 TRIM45Q9H8W5 580 aaPredicted RBP-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 ACKR4Q9NPB9 350 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 HELLSQ9NRZ9 838 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 SLC6A13Q9NSD5 602 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 FANCLQ9NW38 375 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 KLRF1Q9NZS2 232 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 KIAA1456Q9P272 454 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 BAIAP2L1Q9UHR4 511 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 IKZF2Q9UKS7 526 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 C22orf24Q9Y442 160 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 YIPF1Q9Y548 306 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 PCDHGB6Q9Y5F9 930 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 SPAG17Q6Q759 2223 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 COL4A5P29400 1685 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 C2orf16Q68DN1 1984 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 AHCTF1Q8WYP5 2266 aa-1.1□□□□□ -2.59
RNU6-540P-201ENST00000384622 DNAH9Q9NYC9 4486 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 GRIN2DO15399 1336 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 IGLV1-50A0A075B6I6 118 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 K7N7A8 449 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 FXYD1O00168 92 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 MGEA5O60502 916 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 TSPAN3O60637 253 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 AVILO75366 819 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 KATNA1O75449 491 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 SEC14L2O76054 403 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 NXPH4O95158 308 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 IL33O95760 270 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 AIFM1O95831 613 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 CD8AP01732 235 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 GNSP15586 552 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 RPA2P15927 270 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 IGFBP3P17936 291 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 AGAP20933 346 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 TIA1P31483 386 aaKnown RBP eCLIP-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 STK19P49842 368 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 CACNG7P62955 275 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 IRX4P78413 519 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 TMF1P82094 1093 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 CDK3Q00526 305 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 SF3A3Q12874 501 aaKnown RBP eCLIP-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 BYSLQ13895 437 aaKnown RBP-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 TRIM14Q14142 442 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 RPS6KA1Q15418 735 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 IGFBP7Q16270 282 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 FAM83EQ2M2I3 478 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 LETM2Q2VYF4 491 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 PARP10Q53GL7 1025 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 KIAA2026Q5HYC2 2103 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 RFWD3Q6PCD5 774 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 TMEM207Q6UWW9 146 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 IL20RBQ6UXL0 311 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 ZNF600Q6ZNG1 722 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 PRSS45Q7RTY3 260 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 LRRC49Q8IUZ0 686 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 CPOQ8IVL8 374 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 PRPF38AQ8NAV1 312 aaKnown RBP-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 RNF149Q8NC42 400 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 HJURPQ8NCD3 748 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 MCUQ8NE86 351 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 OR10G7Q8NGN6 311 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 PMFBP1Q8TBY8 1022 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 UTP15Q8TED0 518 aaKnown RBP-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 DPH3Q96FX2 82 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 TCEANC2Q96MN5 208 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 MUS81Q96NY9 551 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 TAAR1Q96RJ0 339 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 CD180Q99467 661 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 KLHDC3Q9BQ90 382 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 PI4K2AQ9BTU6 479 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 COLEC11Q9BWP8 271 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 PHF7Q9BWX1 381 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 C22orf23Q9BZE7 217 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 CLPBQ9H078 707 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 PRORYQ9H606 182 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 ZNF287Q9HBT7 754 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 ADGRL4Q9HBW9 690 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 DUS2Q9NX74 493 aaKnown RBP-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 ATG4BQ9Y4P1 393 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 AUP1Q9Y679 476 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 ARHGAP21Q5T5U3 1957 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 KIAA1549Q9HCM3 1950 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 MYO15BQ96JP2 1530 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 AKAP9Q99996 3911 aa-1.11□□□□□ -2.59
RNU6-540P-201ENST00000384622 ADGRA3Q8IWK6 1321 aa-1.12□□□□□ -2.59
RNU6-540P-201ENST00000384622 IGSF9BQ9UPX0 1349 aa-1.12□□□□□ -2.59
RNU6-540P-201ENST00000384622 MED12Q93074 2177 aa-1.12□□□□□ -2.59
RNU6-540P-201ENST00000384622 DNAH10Q8IVF4 4471 aa-1.12□□□□□ -2.59
RNU6-540P-201ENST00000384622 A0A1W2PNM2 257 aa-1.12□□□□□ -2.59
RNU6-540P-201ENST00000384622 ARHGEF33A8MVX0 844 aa-1.12□□□□□ -2.59
RNU6-540P-201ENST00000384622 FAM90A26D6RGX4 464 aa-1.12□□□□□ -2.59
RNU6-540P-201ENST00000384622 TMX2-CTNND1H3BSU7 103 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms