RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 ZNF470Q6ECI4 717 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 CASC4Q6P4E1 433 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 XKRXQ6PP77 449 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 CYHR1Q6ZMK1 362 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 GDF7Q7Z4P5 450 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 VN1R4Q7Z5H5 301 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 PLD3Q8IV08 490 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 LMNTD2Q8IXW0 634 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 GIMAP7Q8NHV1 300 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 PRAP1Q96NZ9 151 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 PHF12Q96QT6 1004 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 FAM129AQ9BZQ8 928 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 PCBD2Q9H0N5 130 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 MED16Q9Y2X0 877 aa16.9■□□□□ 0.3
RPUSD3-201ENST00000383820 CTAGE9A4FU28 777 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 AVILO75366 819 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 SEC24DO94855 1032 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 MLYCDO95822 493 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 MLNP12872 115 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 AGAP20933 346 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 HTR1EP28566 365 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 BCL6P41182 706 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 CUL1Q13616 776 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 EXT1Q16394 746 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 MINDY4Q4G0A6 757 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 ACER2Q5QJU3 275 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 CAND1Q86VP6 1230 aaKnown RBP16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 CAMKVQ8NCB2 501 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 OR51Q1Q8NH59 317 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 CCDC177Q9NQR7 707 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 ABCF3Q9NUQ8 709 aa16.89■□□□□ 0.29
RPUSD3-201ENST00000383820 SDR42E2A6NKP2 422 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 A8MUI8 341 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 TTI1O43156 1089 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 SLC19A2O60779 497 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 IL10P22301 178 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 XCR1P46094 333 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 SNRPNP63162 240 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 MEP1AQ16819 746 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 KRTCAP3Q53RY4 240 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 MFSD4BQ5TF39 518 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 LRRC8EQ6NSJ5 796 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 TMEM214Q6NUQ4 689 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 ZNF549Q6P9A3 640 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 LANCL3Q6ZV70 420 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 UBE2R2Q712K3 238 aaPredicted RBP16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 ANKRD37Q7Z713 158 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 M1APQ8TC57 530 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 CD200R1Q8TD46 325 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 CALML6Q8TD86 181 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 THAP3Q8WTV1 239 aaPredicted RBP16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 ZNF669Q96BR6 464 aaPredicted RBP16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 TM4SF19Q96DZ7 209 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 KCNK13Q9HB14 408 aa16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 XAB2Q9HCS7 855 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-201ENST00000383820 IGHV3-20A0A0C4DH32 117 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 ZCWPW2A0A1B0GU75 182 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 GOLGA6L6A8MZA4 724 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 CDK2AP1O14519 115 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 PMP22Q01453 160 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 GPS1Q13098 491 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 CTBP1Q13363 440 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 TUBA3CQ13748 450 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 ZXDCQ2QGD7 858 aaPredicted RBP16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 TUBA3EQ6PEY2 450 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 ZNF662Q6ZS27 426 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 PRSS41Q7RTY9 318 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 DENND6AQ8IWF6 608 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 BEST3Q8N1M1 668 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 SPC24Q8NBT2 197 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 MDS2Q8NDY4 140 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 MCUQ8NE86 351 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 GPR21Q99679 349 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 UTP23Q9BRU9 249 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 ANKHQ9HCJ1 492 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 MMP25Q9NPA2 562 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 FBXO6Q9NRD1 293 aaPredicted RBP16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 ZNF835Q9Y2P0 537 aa16.87■□□□□ 0.29
RPUSD3-201ENST00000383820 ASPDHA6ND91 283 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 CEP104O60308 925 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 COX6B1P14854 86 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 IL1RNP18510 177 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 POU3F2P20265 443 aaPredicted RBP16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 CCND1P24385 295 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 SLC1A2P43004 574 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 SMSP52788 366 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 TBPL1P62380 186 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 CSNK1G2P78368 415 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 TRIP13Q15645 432 aaPredicted RBP16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 Q6ZPB1 254 aaPredicted RBP16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 C17orf64Q86WR6 236 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 CPNE9Q8IYJ1 553 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 LGI4Q8N135 537 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 AMER2Q8N7J2 671 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 TMEM178AQ8NBL3 297 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 PLPP5Q8NEB5 264 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 SCMH1Q96GD3 660 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 MAGED4Q96JG8 741 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 CCDC138Q96M89 665 aa16.86■□□□□ 0.29
RPUSD3-201ENST00000383820 GPR137Q96N19 417 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms