RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 DNAJA1P31689 397 aaKnown RBP15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 KIR3DL1P43629 444 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 NUDT6P53370 316 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 CRYBA2P53672 197 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 B4GALNT1Q00973 533 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 VMACQ2NL98 169 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 PTCHD3Q3KNS1 767 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 ADNP2Q6IQ32 1131 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 ZNF783Q6ZMS7 281 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 Q6ZVL8 140 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 APOL4Q9BPW4 351 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 SLC32A1Q9H598 525 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 ZDHHC4Q9NPG8 344 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 BTBD3Q9Y2F9 522 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 OR2A25A4D2G3 310 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 PABPN1LA6NDY0 278 aaKnown RBP15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 GSTT2P0CG29 244 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 GSTT2BP0CG30 244 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 FPR1P21462 350 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 KDELR2P33947 212 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 ARHGDIAP52565 204 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 TPTEP56180 551 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 UGT8Q16880 541 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 LY6G5CQ5SRR4 150 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 ZNF362Q5T0B9 420 aaPredicted RBP15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 AGAP7PQ5VUJ5 663 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 KIAA1614Q5VZ46 1190 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 LMNTD1Q8N9Z9 388 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 MCFD2Q8NI22 146 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 FIBINQ8TAL6 211 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 ITPKCQ96DU7 683 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 STOML2Q9UJZ1 356 aa15.72■□□□□ 0.11
NKX3-1-201ENST00000380871 KCNE1BA0A087WTH5 132 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 MYO1DO94832 1006 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 SERPINB10P48595 397 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 PTSQ03393 145 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 ABRQ12979 859 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 CDKN3Q16667 212 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 SMU1Q2TAY7 513 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 USP45Q70EL2 814 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 HTR3DQ70Z44 454 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 UBE2R2Q712K3 238 aaPredicted RBP15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 PSD4Q8NDX1 1056 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 PHF10Q8WUB8 498 aaKnown RBP15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 DACH2Q96NX9 599 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 PSD2Q9BQI7 771 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 DCSTAMPQ9H295 470 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 ITM2CQ9NQX7 267 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 SLC25A13Q9UJS0 675 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 POU2F3Q9UKI9 436 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 EVPLLA8MZ36 301 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 TBX1O43435 398 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 IL1RNP18510 177 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 GRK5P34947 590 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 NKX2-5P52952 324 aaPredicted RBP15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 CAMK2GQ13555 558 aaPredicted RBP15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 NOXRED1Q6NXP6 359 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 MACC1Q6ZN28 852 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 TMC8Q8IU68 726 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 FAM83FQ8NEG4 500 aaPredicted RBP15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 CEP295NLQ96MC4 621 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 MTERF1Q99551 399 aaKnown RBP15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 C6orf62Q9GZU0 229 aaPredicted RBP15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 OSGIN1Q9UJX0 560 aa15.71■□□□□ 0.11
NKX3-1-201ENST00000380871 TRBV5-4A0A0C4DH59 114 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 SEMG1P04279 462 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 XPAP23025 273 aaPredicted RBP15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 CRISP3P54108 245 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 WNT3P56703 355 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 NPRL3Q12980 569 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 TPRG1Q6ZUI0 275 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 CYP2U1Q7Z449 544 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 SLC29A3Q9BZD2 475 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 CAB39Q9Y376 341 aaPredicted RBP15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 DBTP11182 482 aaKnown RBP15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 TYRP14679 529 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 AMD1P17707 334 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 GADD45AP24522 165 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 EIF2DP41214 584 aaKnown RBP15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 CLK1P49759 484 aaKnown RBP15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 PRMT2P55345 433 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 SELENBP1Q13228 472 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 CACUL1Q86Y37 369 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 NELL1Q92832 810 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 TESCQ96BS2 214 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 RETREG1Q9H6L5 497 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 CXXC1Q9P0U4 656 aaPredicted RBP15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 PCDHGA6Q9Y5G7 932 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 M0R082 166 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 OPN1SWP03999 348 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 NTRK1P04629 796 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 SPNP16150 400 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 GTF2E2P29084 291 aaKnown RBP15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 RCVRNP35243 200 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 SLC19A1P41440 591 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 KCNJ8Q15842 424 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 TTLL9Q3SXZ7 439 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 ARSIQ5FYB1 569 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 PRSS48Q7RTY5 328 aa15.7■□□□□ 0.1
NKX3-1-201ENST00000380871 SERPINA11Q86U17 422 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms