RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 AMER3Q8N944 861 aa23.41■■□□□ 1.34
TNFRSF4-201ENST00000379236 SPATA4Q8NEY3 305 aa23.41■■□□□ 1.34
TNFRSF4-201ENST00000379236 ZCCHC10Q8TBK6 192 aa23.41■■□□□ 1.34
TNFRSF4-201ENST00000379236 CDKL2Q92772 493 aa23.41■■□□□ 1.34
TNFRSF4-201ENST00000379236 PYCR2Q96C36 320 aa23.41■■□□□ 1.34
TNFRSF4-201ENST00000379236 ERP44Q9BS26 406 aa23.41■■□□□ 1.34
TNFRSF4-201ENST00000379236 FAM129AQ9BZQ8 928 aa23.41■■□□□ 1.34
TNFRSF4-201ENST00000379236 ANKHQ9HCJ1 492 aa23.41■■□□□ 1.34
TNFRSF4-201ENST00000379236 SAYSD1Q9NPB0 183 aa23.41■■□□□ 1.34
TNFRSF4-201ENST00000379236 WHRNQ9P202 907 aa23.41■■□□□ 1.34
TNFRSF4-201ENST00000379236 SH2B3Q9UQQ2 575 aa23.41■■□□□ 1.34
TNFRSF4-201ENST00000379236 PSAT1Q9Y617 370 aa23.41■■□□□ 1.34
TNFRSF4-201ENST00000379236 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.41■■□□□ 1.34
TNFRSF4-201ENST00000379236 H0YIG0 161 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 PCDH17O14917 1159 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 ZNF37AP17032 561 aaPredicted RBP23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 GNLYP22749 145 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 MAT1AQ00266 395 aaKnown RBP23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 SYT16Q17RD7 645 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 PLEKHN1Q494U1 663 aaPredicted RBP23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 NDUFAF7Q7L592 441 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 VN1R4Q7Z5H5 301 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 LAPTM4BQ86VI4 370 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 ZC3HC1Q86WB0 502 aaKnown RBP23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 KBTBD2Q8IY47 623 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 OR9A4Q8NGU2 314 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 OR56A3Q8NH54 315 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 SLC13A3Q8WWT9 602 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 METTL21AQ8WXB1 218 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 FBXL8Q96CD0 374 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 PDLIM5Q96HC4 596 aaKnown RBP23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 WDR77Q9BQA1 342 aaPredicted RBP23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 TGIF2Q9GZN2 237 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 MKL2Q9ULH7 1088 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 DYRK1BQ9Y463 629 aa23.4■■□□□ 1.34
TNFRSF4-201ENST00000379236 FANCGO15287 622 aa23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 NSA2O95478 260 aaKnown RBP23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 NPPBP16860 134 aa23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 BCL6P41182 706 aa23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 UQCRFS1P47985 274 aa23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 ATG9BQ674R7 924 aa23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 ARHGEF39Q8N4T4 335 aa23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 EGFL8Q99944 293 aa23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 MACROD1Q9BQ69 325 aa23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 ZBTB20Q9HC78 741 aaPredicted RBP23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 MOCS1Q9NZB8 636 aa23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 NOVA2Q9UNW9 492 aaKnown RBP23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 MRPS2Q9Y399 296 aaKnown RBP23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 UTP11Q9Y3A2 253 aaKnown RBP23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 DOPEY2Q9Y3R5 2298 aa23.39■■□□□ 1.33
TNFRSF4-201ENST00000379236 RP1L1Q8IWN7 2480 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 NPEPPSL1A6NEC2 478 aa23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 TP73O15350 636 aa23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 EIF3HO15372 352 aaKnown RBP eCLIP23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 RAD51CO43502 376 aa23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 IL1RNP18510 177 aa23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 GLRBP48167 497 aa23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 CSHL1Q14406 222 aa23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 MINDY4Q4G0A6 757 aa23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 ZC3H7AQ8IWR0 971 aaKnown RBP23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 MFSD9Q8NBP5 474 aa23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 PPP4R1Q8TF05 950 aa23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 CNDP1Q96KN2 507 aa23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 RHOJQ9H4E5 214 aa23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 RIC8BQ9NVN3 520 aa23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 RELNP78509 3460 aa23.38■■□□□ 1.33
TNFRSF4-201ENST00000379236 OR1F1O43749 312 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 SERPIND1P05546 499 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 COX6A1P12074 109 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 AP2B1P63010 937 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 MEF2AQ02078 507 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 ZNF460Q14592 562 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 FHL5Q5TD97 284 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 TMEM214Q6NUQ4 689 aaKnown RBP23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 SBSNQ6UWP8 590 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 ISLR2Q6UXK2 745 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 SYT10Q6XYQ8 523 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 CISD2Q8N5K1 135 aaKnown RBP23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 DNAJB14Q8TBM8 379 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 SLC5A11Q8WWX8 675 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 RAB17Q9H0T7 212 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 GPAMQ9HCL2 828 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 HCN3Q9P1Z3 774 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 CTNNAL1Q9UBT7 734 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 COL12A1Q99715 3063 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 SCN2AQ99250 2005 aa23.37■■□□□ 1.33
TNFRSF4-201ENST00000379236 ESPL1Q14674 2120 aa23.36■■□□□ 1.33
TNFRSF4-201ENST00000379236 NDUFS4O43181 175 aa23.36■■□□□ 1.33
TNFRSF4-201ENST00000379236 LCMT2O60294 686 aaKnown RBP23.36■■□□□ 1.33
TNFRSF4-201ENST00000379236 C8orf89P0DMQ9 161 aa23.36■■□□□ 1.33
TNFRSF4-201ENST00000379236 SSTR1P30872 391 aa23.36■■□□□ 1.33
TNFRSF4-201ENST00000379236 TAS2R39P59534 338 aa23.36■■□□□ 1.33
TNFRSF4-201ENST00000379236 ETF1P62495 437 aaKnown RBP23.36■■□□□ 1.33
TNFRSF4-201ENST00000379236 SKP1P63208 163 aa23.36■■□□□ 1.33
TNFRSF4-201ENST00000379236 TMEM207Q6UWW9 146 aa23.36■■□□□ 1.33
TNFRSF4-201ENST00000379236 LINC00696Q6ZRV3 163 aa23.36■■□□□ 1.33
TNFRSF4-201ENST00000379236 Q6ZS92 163 aa23.36■■□□□ 1.33
TNFRSF4-201ENST00000379236 ADAMTSL2Q86TH1 951 aa23.36■■□□□ 1.33
TNFRSF4-201ENST00000379236 C17orf53Q8N3J3 647 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF4-201ENST00000379236 KCT2Q8NC54 265 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms