RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CA5BP1Q8WTZ4 195 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 C14orf79Q96F83 325 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 FRMD6Q96NE9 622 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 NPAS2Q99743 824 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 PPT2Q9UMR5 302 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 E5RI56 91 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 H7BY64 318 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 SGK494L7N484 410 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 MYO1CO00159 1063 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 ASNA1O43681 348 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 LIASO43766 372 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 VAPBO95292 243 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 CATP04040 527 aaKnown RBP16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 F7P08709 466 aaPredicted RBP16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 ZSCAN5DPP0CG00 497 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 ERGP11308 486 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 STIP1P31948 543 aaKnown RBP16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 PRDX1Q06830 199 aaKnown RBP16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 ACTN3Q08043 901 aaPredicted RBP16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 FAM53BQ14153 422 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 KCNJ11Q14654 390 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 GHDCQ8N2G8 530 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 MPP5Q8N3R9 675 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 MCOLN3Q8TDD5 553 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 PEX13Q92968 403 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 PRAP1Q96NZ9 151 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 BIRC8Q96P09 236 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 MCCC2Q9HCC0 563 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 FAM114A2Q9NRY5 505 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 TREX1Q9NSU2 369 aa16.77■□□□□ 0.28
PDLIM4-202ENST00000379018 ZNF839A8K0R7 811 aa16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 NADKO95544 446 aaPredicted RBP16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 TSPAN12O95859 305 aa16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 SLC16A8O95907 504 aa16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 ZNF24P17028 368 aa16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 TERF1P54274 439 aa16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 CUL1Q13616 776 aa16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 OASLQ15646 514 aaKnown RBP16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 SFT2D3Q587I9 215 aa16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 PAPD4Q6PIY7 484 aaKnown RBP16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 SPNS3Q6ZMD2 512 aa16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 SDCCAG8Q86SQ7 713 aaPredicted RBP16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 ZNF480Q8WV37 535 aa16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 LPGAT1Q92604 370 aa16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 MFSD3Q96ES6 412 aa16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 SCMH1Q96GD3 660 aa16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 SPOCK3Q9BQ16 436 aa16.76■□□□□ 0.27
PDLIM4-202ENST00000379018 INTS1Q8N201 2190 aaKnown RBP16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 ASPDHA6ND91 283 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 ZNF860A6NHJ4 632 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 BTNL10A8MVZ5 291 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 MIF4GDA9UHW6 222 aaKnown RBP16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 PRRG2O14669 202 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 RDH16O75452 317 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 PSIP1O75475 530 aaKnown RBP16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 NSA2O95478 260 aaKnown RBP16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 PTMSP20962 102 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 MGAT1P26572 445 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 ATP5DP30049 168 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 TAS2R50P59544 299 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 BASP1P80723 227 aaKnown RBP16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 GBX1Q14549 363 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 ARHGAP19Q14CB8 494 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 EXT1Q16394 746 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 KCTD19Q17RG1 926 aaPredicted RBP16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 SEL1L2Q5TEA6 688 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 SLC25A25Q6KCM7 469 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 MRNIPQ6NTE8 343 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 RAD9BQ6WBX8 426 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 DOLPP1Q86YN1 238 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 SIAH3Q8IW03 269 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 SYCE1Q8N0S2 351 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 CPSF7Q8N684 471 aaKnown RBP16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 SLC5A8Q8N695 610 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 TSLPQ969D9 159 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 CDCP1Q9H5V8 836 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 SYBUQ9NX95 663 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 LRFN1Q9P244 771 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 PAK5Q9P286 719 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 PCDHGB6Q9Y5F9 930 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 NF1P21359 2839 aa16.75■□□□□ 0.27
PDLIM4-202ENST00000379018 FAM90A27PA6NNH2 459 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 E7ENX8 843 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 H0YIG0 161 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 H3BMM5 538 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 FANCGO15287 622 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 SLC25A12O75746 678 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 SP1P08047 785 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 ARNTP27540 789 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 PTGER1P34995 402 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 RFC3P40938 356 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 AGTR2P50052 363 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 ABATP80404 500 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 TAP2Q03519 686 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 PTK6Q13882 451 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 ABRAXAS2Q15018 415 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 RNFT1Q5M7Z0 435 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 RNF187Q5TA31 235 aaPredicted RBP16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 MEI1Q5TIA1 1274 aa16.74■□□□□ 0.27
PDLIM4-202ENST00000379018 ZNF468Q5VIY5 522 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms