RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 KRT6AP02538 564 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 KRT6BP04259 564 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 ITGAMP11215 1152 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 SELPP16109 830 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 DDX5P17844 614 aaKnown RBP13.4□□□□□ -0.26
SF1-205ENST00000377394 S100A3P33764 101 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 SMAD3P84022 425 aaKnown RBP13.4□□□□□ -0.26
SF1-205ENST00000377394 BCL2L1Q07817 233 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 SREBF2Q12772 1141 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 IL18R1Q13478 541 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 GBX1Q14549 363 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 SHQ1Q6PI26 577 aaKnown RBP13.4□□□□□ -0.26
SF1-205ENST00000377394 CYP4Z1Q86W10 505 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 ZSWIM9Q86XI8 627 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 ANGPTL6Q8NI99 470 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 ADAMTS19Q8TE59 1207 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 VPS35Q96QK1 796 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 HHIPQ96QV1 700 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 MYOCQ99972 504 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 NUAK2Q9H093 628 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 RNF186Q9NXI6 227 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 AFF4Q9UHB7 1163 aaKnown RBP13.4□□□□□ -0.26
SF1-205ENST00000377394 AGAP14A8MT82 685 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 A8MX80 341 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 hCG_2039718K7EN88 272 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 GADD45AP24522 165 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 GRK5P34947 590 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 ZXDBP98169 803 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 SLC14A1Q13336 389 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 RFX4Q33E94 735 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 GPR33Q49SQ1 333 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 CARD16Q5EG05 197 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 PRR23CQ6ZRP0 262 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 TSPAN33Q86UF1 283 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 TMEM132CQ8N3T6 1108 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 HJURPQ8NCD3 748 aaPredicted RBP13.39□□□□□ -0.27
SF1-205ENST00000377394 RNF170Q96K19 258 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 NECTIN4Q96NY8 510 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 SLC22A12Q96S37 553 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 GDF15Q99988 308 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 SLC32A1Q9H598 525 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 TOR4AQ9NXH8 423 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 GPRC5BQ9NZH0 403 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 BACE2Q9Y5Z0 518 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 ZNF106Q9H2Y7 1883 aaKnown RBP13.39□□□□□ -0.27
SF1-205ENST00000377394 ARHGAP33O14559 1287 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 AIREO43918 545 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 APOA1P02647 267 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 C1QCP02747 245 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 ANXA5P08758 320 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 HOXB6P17509 224 aaKnown RBP13.39□□□□□ -0.27
SF1-205ENST00000377394 SPAM1P38567 509 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 OR3A3P47888 321 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 ABHD18Q0P651 414 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 C19orf57Q0VDD7 668 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 SLAMF1Q13291 335 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 LRRC26Q2I0M4 334 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 TTLL9Q3SXZ7 439 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 YIF1BQ5BJH7 314 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 TMEM150AQ86TG1 271 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 CCDC28AQ8IWP9 274 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 CBARPQ8N350 705 aaPredicted RBP13.39□□□□□ -0.27
SF1-205ENST00000377394 LSMEM1Q8N8F7 131 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.39□□□□□ -0.27
SF1-205ENST00000377394 GPR26Q8NDV2 337 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 TBC1D20Q96BZ9 403 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 TSSK3Q96PN8 268 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 SDHCQ99643 169 aaPredicted RBP13.39□□□□□ -0.27
SF1-205ENST00000377394 GABARAPL1Q9H0R8 117 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 RIBC2Q9H4K1 309 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 RANGRFQ9HD47 186 aaPredicted RBP13.39□□□□□ -0.27
SF1-205ENST00000377394 TAS2R9Q9NYW1 312 aa13.39□□□□□ -0.27
SF1-205ENST00000377394 LOC100506127A0A0U1RQW1 187 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.38□□□□□ -0.27
SF1-205ENST00000377394 A0A1W2PQ45 241 aaPredicted RBP13.38□□□□□ -0.27
SF1-205ENST00000377394 A0A1W2PQY0 241 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 TFECO14948 347 aaPredicted RBP13.38□□□□□ -0.27
SF1-205ENST00000377394 ZNF821O75541 412 aaPredicted RBP13.38□□□□□ -0.27
SF1-205ENST00000377394 PRPS2P11908 318 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 SDC1P18827 310 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 CBLP22681 906 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 TM4SF4P48230 202 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 RPIAP49247 311 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 CDH18Q13634 790 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 IRF3Q14653 427 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 DUSP7Q16829 419 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 TUBA3EQ6PEY2 450 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 TPGS1Q6ZTW0 290 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 CEP68Q76N32 757 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 ZDHHC21Q8IVQ6 265 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 RASSF5Q8WWW0 418 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 SELENOMQ8WWX9 145 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 POP5Q969H6 163 aaKnown RBP13.38□□□□□ -0.27
SF1-205ENST00000377394 VOPP1Q96AW1 172 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 TESCQ96BS2 214 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 RUBCNLQ9H714 662 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 RASSF1Q9NS23 344 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 KCTD5Q9NXV2 234 aa13.38□□□□□ -0.27
SF1-205ENST00000377394 H3BQ06 376 aaPredicted RBP13.38□□□□□ -0.27
SF1-205ENST00000377394 ABLIM3O94929 683 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms