RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CARS2Q9HA77 564 aaKnown RBP13.51□□□□□ -0.25
MSH5-202ENST00000375740 NTN4Q9HB63 628 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 C8orf4Q9NR00 106 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 STOX2Q9P2F5 926 aaPredicted RBP13.51□□□□□ -0.25
MSH5-202ENST00000375740 LIMD1Q9UGP4 676 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 ELOVL7A1L3X0 281 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 E7EQ34 232 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 NPIPB8E9PQR5 432 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 SPINT1O43278 529 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 ERN1O75460 977 aaKnown RBP13.51□□□□□ -0.25
MSH5-202ENST00000375740 RAP2AP10114 183 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 CHRNB3Q05901 458 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 DOC2AQ14183 400 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 LRIF1Q5T3J3 769 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 ENPP6Q6UWR7 440 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 SLC22A16Q86VW1 577 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 VN1R2Q8NFZ6 395 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 FBXO30Q8TB52 745 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 ITCHQ96J02 903 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 CNDP2Q96KP4 475 aaKnown RBP13.51□□□□□ -0.25
MSH5-202ENST00000375740 MAGEB10Q96LZ2 347 aaPredicted RBP13.51□□□□□ -0.25
MSH5-202ENST00000375740 COQ10AQ96MF6 247 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 PKP4Q99569 1192 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 EBPLQ9BY08 206 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 EPS8L2Q9H6S3 715 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 KAT8Q9H7Z6 458 aaKnown RBP13.51□□□□□ -0.25
MSH5-202ENST00000375740 TRPV5Q9NQA5 729 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 ZNF639Q9UID6 485 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 MAN2B2Q9Y2E5 1009 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 A0A096LPI6 279 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 OTOL1A6NHN0 477 aaPredicted RBP13.5□□□□□ -0.25
MSH5-202ENST00000375740 PLK4O00444 970 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 ALDH4A1P30038 563 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 CDKN2CP42773 168 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 SLC13A2Q13183 592 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 DPY19L1Q2PZI1 675 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 FNDC3BQ53EP0 1204 aaKnown RBP13.5□□□□□ -0.25
MSH5-202ENST00000375740 TMC5Q6UXY8 1006 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 USP43Q70EL4 1123 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 R3HCC1LQ7Z5L2 792 aaKnown RBP13.5□□□□□ -0.25
MSH5-202ENST00000375740 ADGRD2Q7Z7M1 963 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 ETFBKMTQ8IXQ9 262 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 FAM9CQ8IZT9 166 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 C10orf111Q8N326 155 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 DNAJB8Q8NHS0 232 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 WDR20Q8TBZ3 569 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 ATL1Q8WXF7 558 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 ARRDC3Q96B67 414 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 TESCQ96BS2 214 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 DTD2Q96FN9 168 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 OR4K3Q96R72 315 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 MTERF1Q99551 399 aaKnown RBP13.5□□□□□ -0.25
MSH5-202ENST00000375740 UGT2B28Q9BY64 529 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 RMND5AQ9H871 391 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 GPRC5BQ9NZH0 403 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 UPK1AO00322 258 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 CXCR6O00574 342 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 UGDHO60701 494 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 CATP04040 527 aaKnown RBP13.5□□□□□ -0.25
MSH5-202ENST00000375740 PRNPP04156 253 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 HTR1AP08908 422 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 JUNBP17275 347 aaPredicted RBP13.5□□□□□ -0.25
MSH5-202ENST00000375740 LSM3P62310 102 aaKnown RBP13.5□□□□□ -0.25
MSH5-202ENST00000375740 DDX39BQ13838 428 aaKnown RBP13.5□□□□□ -0.25
MSH5-202ENST00000375740 PAGE2BQ5JRK9 111 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 C9orf64Q5T6V5 341 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 ATG9BQ674R7 924 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 NLRP8Q86W28 1048 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 MICU2Q8IYU8 434 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 SPARTQ8N0X7 666 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 PARP8Q8N3A8 854 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 CPPED1Q9BRF8 314 aaPredicted RBP13.5□□□□□ -0.25
MSH5-202ENST00000375740 PCDHGA3Q9Y5H0 932 aa13.5□□□□□ -0.25
MSH5-202ENST00000375740 K7ESM1 405 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 NPC1O15118 1278 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 GUCY1B2O75343 617 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 SLC16A8O95907 504 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 SOD1P00441 154 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 C7P10643 843 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 BMP4P12644 408 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 GZMMP51124 257 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 SF1Q15637 639 aaKnown RBP13.49□□□□□ -0.25
MSH5-202ENST00000375740 NKG7Q16617 165 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 FAM78AQ5JUQ0 283 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 OR4F3Q6IEY1 312 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 SLCO6A1Q86UG4 719 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 SFTPA1Q8IWL2 248 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 TMEM132CQ8N3T6 1108 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 FAM162AQ96A26 154 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 TP63Q9H3D4 680 aaPredicted RBP13.49□□□□□ -0.25
MSH5-202ENST00000375740 HMG20AQ9NP66 347 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 GULP1Q9UBP9 304 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 VPS29Q9UBQ0 182 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 AP3M1Q9Y2T2 418 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 IFT52Q9Y366 437 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 LRRK1Q38SD2 2015 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 LAMA3Q16787 3333 aa13.49□□□□□ -0.25
MSH5-202ENST00000375740 DEAF1O75398 565 aaPredicted RBP13.49□□□□□ -0.25
MSH5-202ENST00000375740 RECQL5O94762 991 aaPredicted RBP13.49□□□□□ -0.25
MSH5-202ENST00000375740 SCELO95171 688 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms