RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 FOLH1Q04609 750 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ARMCX6Q7L4S7 300 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 METTL4Q8N3J2 472 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 FAM110BQ8TC76 370 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GFM2Q969S9 779 aaKnown RBP17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 RAB11FIP5Q9BXF6 653 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 Q9H521 79 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PIF1Q9H611 641 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 NT5DC2Q9H857 520 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 FZD3Q9NPG1 666 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 TAC3Q9UHF0 121 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MMP17Q9ULZ9 603 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 INVSQ9Y283 1065 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ELOVL7A1L3X0 281 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 H3BQ06 376 aaPredicted RBP17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SLC31A1O15431 190 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GMNNO75496 209 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SCELO95171 688 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 NDUFV2P19404 249 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 IDSP22304 550 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CXCR2P25025 360 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SERPINB1P30740 379 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 REEP5Q00765 189 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ZNF763Q0D2J5 394 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 LRRC74AQ0VAA2 488 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CCINQ13939 588 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 DUS1LQ6P1R4 473 aaKnown RBP17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 COMMD6Q7Z4G1 85 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 VN1R5Q7Z5H4 357 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 AMIGO2Q86SJ2 522 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ANKRD46Q86W74 232 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MICU2Q8IYU8 434 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PACRGLQ8N7B6 248 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GPR156Q8NFN8 814 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 RPLP0P6Q8NHW5 317 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 POP5Q969H6 163 aaKnown RBP17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 COQ8BQ96D53 544 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ZNF597Q96LX8 424 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 FERD3LQ96RJ6 166 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 OSGEPL1Q9H4B0 414 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MVB12BQ9H7P6 319 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ATP6V1HQ9UI12 483 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 BTNL2Q9UIR0 455 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 KCNK6Q9Y257 313 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GMEB1Q9Y692 573 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SPTBN5Q9NRC6 3674 aaKnown RBP17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SNRNP200O75643 2136 aaKnown RBP17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 A0A0C4DFX4 3053 aa17.3■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SHISA7A6NL88 538 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PTX3P26022 381 aaPredicted RBP17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PKLRP30613 574 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 RAB28P51157 221 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MEF2AQ02078 507 aaPredicted RBP17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ABHD18Q0P651 414 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SMAD4Q13485 552 aaKnown RBP17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SF1Q15637 639 aaKnown RBP17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 UAP1L1Q3KQV9 507 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 IER5LQ5T953 404 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 INTS11Q5TA45 600 aaKnown RBP17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 KIAA1324Q6UXG2 1013 aaKnown RBP17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 TMEM92Q6UXU6 159 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MARVELD2Q8N4S9 558 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ZNF740Q8NDX6 193 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 OR4K1Q8NGD4 311 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CENPNQ96H22 339 aaPredicted RBP17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CAMK1GQ96NX5 476 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PRPF18Q99633 342 aaKnown RBP17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 AIF1LQ9BQI0 150 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 DUSP26Q9BV47 211 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 COQ10BQ9H8M1 238 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 FGF22Q9HCT0 170 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MYNNQ9NPC7 610 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 C8orf4Q9NR00 106 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 LIMD1Q9UGP4 676 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 FANCMQ8IYD8 2048 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GNG14A0A1W2PPG7 69 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PRSS38A1L453 326 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 C10orf142B7Z368 130 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 FPGTO14772 594 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GSTA4O15217 222 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SEMA3DO95025 777 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 B3GALT4O96024 378 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 LAMP1P11279 417 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 RPL3P39023 403 aaKnown RBP17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CCT8P50990 548 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CCR8P51685 355 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 NFATC4Q14934 902 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ATP6AP1Q15904 470 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 HKDC1Q2TB90 917 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CPTPQ5TA50 214 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ANXA8L1Q5VT79 327 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PPP4R4Q6NUP7 873 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GPR155Q7Z3F1 870 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SERPINA11Q86U17 422 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 FAM124AQ86V42 546 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 LINC01555Q8NAE3 123 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 OR2L8Q8NGY9 312 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MIEF2Q96C03 454 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 FAM120BQ96EK7 910 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms