RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 RUNDC3AQ59EK9 446 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 LYSMD4Q5XG99 296 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 KIAA0895LQ68EN5 471 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 NEK5Q6P3R8 708 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 Q6ZVL8 140 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 MSRB3Q8IXL7 192 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 L3MBTL4Q8NA19 623 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 HCAR2Q8TDS4 363 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 ASZ1Q8WWH4 475 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 PIGKQ92643 395 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 FOXJ1Q92949 421 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 TBCDQ9BTW9 1192 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 MIR1-1HGQ9H1L0 117 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 RMND5AQ9H871 391 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 PCDH12Q9NPG4 1184 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 ADGRE2Q9UHX3 823 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 SLC22A14Q9Y267 594 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 ZBTB32Q9Y2Y4 487 aaPredicted RBP15□□□□□ -0.01
CCDC40-202ENST00000374876 WDR87Q6ZQQ6 2873 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 A0A087WXM4 84 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 TSPAN11A1L157 253 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 H3BSA7 217 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 ERN1O75460 977 aaKnown RBP15□□□□□ -0.01
CCDC40-202ENST00000374876 AP2A2O94973 939 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 BMP10O95393 424 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 CLIC3O95833 236 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 FTH1P02794 183 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 PCNAP12004 261 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 RPL10P27635 214 aaKnown RBP15□□□□□ -0.01
CCDC40-202ENST00000374876 ETV3P41162 512 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 ALDH3B2P48448 385 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 DCDC1P59894 354 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 CYBRD1Q53TN4 286 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 OTUD3Q5T2D3 398 aaPredicted RBP15□□□□□ -0.01
CCDC40-202ENST00000374876 LAIR1Q6GTX8 287 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 TMEM214Q6NUQ4 689 aaKnown RBP15□□□□□ -0.01
CCDC40-202ENST00000374876 ABRAXAS1Q6UWZ7 409 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 NEK10Q6ZWH5 1172 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 FBXO30Q8TB52 745 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 FAM162AQ96A26 154 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 CMTM7Q96FZ5 175 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 MAGEB10Q96LZ2 347 aaPredicted RBP15□□□□□ -0.01
CCDC40-202ENST00000374876 SMOC1Q9H4F8 434 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 TUBA8Q9NY65 449 aaPredicted RBP15□□□□□ -0.01
CCDC40-202ENST00000374876 ZFR2Q9UPR6 939 aaKnown RBP15□□□□□ -0.01
CCDC40-202ENST00000374876 TMED5Q9Y3A6 229 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 CEPT1Q9Y6K0 416 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 A0A1W2PQU0 124 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 UPK3BL1B0FP48 263 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 UPK3BL2E5RIL1 263 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 AREL1O15033 823 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 SCELO95171 688 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 SNAP29O95721 258 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 HALP42357 657 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 FRG2Q64ET8 278 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 GCNT7Q6ZNI0 430 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 PATL1Q86TB9 770 aaKnown RBP14.99□□□□□ -0.01
CCDC40-202ENST00000374876 BEND7Q8N7W2 519 aaPredicted RBP14.99□□□□□ -0.01
CCDC40-202ENST00000374876 RAB7BQ96AH8 199 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 ITCHQ96J02 903 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 TSSK3Q96PN8 268 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 FRG2BQ96QU4 278 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 WRAP53Q9BUR4 548 aaKnown RBP14.99□□□□□ -0.01
CCDC40-202ENST00000374876 RIOK2Q9BVS4 552 aaKnown RBP14.99□□□□□ -0.01
CCDC40-202ENST00000374876 ATG10Q9H0Y0 220 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 NTN4Q9HB63 628 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 RAD18Q9NS91 495 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 FAM8A1Q9UBU6 413 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 PCDHB14Q9Y5E9 798 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 A0A096LPI6 279 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 KRT87PA6NCN2 255 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 OR2AG2A6NM03 316 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 CXCR6O00574 342 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 CLGNO14967 610 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 MMP20O60882 483 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 ALBP02768 609 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 CDH2P19022 906 aaPredicted RBP14.99□□□□□ -0.01
CCDC40-202ENST00000374876 PRPH2P23942 346 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 MAP4P27816 1152 aaKnown RBP14.99□□□□□ -0.01
CCDC40-202ENST00000374876 CHIT1Q13231 466 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 PGS1Q32NB8 556 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 GTDC1Q4AE62 458 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 ATG9BQ674R7 924 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 TBPL2Q6SJ96 375 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 ENPP6Q6UWR7 440 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 CYP2U1Q7Z449 544 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 PHACTR4Q8IZ21 702 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 OFCC1Q8IZS5 231 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 TMEM132CQ8N3T6 1108 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 TRAM1L1Q8N609 369 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 NCLNQ969V3 563 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 TMBIM1Q969X1 311 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 ZSCAN5AQ9BUG6 496 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 PAIP1Q9H074 479 aaKnown RBP14.99□□□□□ -0.01
CCDC40-202ENST00000374876 KAT8Q9H7Z6 458 aaKnown RBP14.99□□□□□ -0.01
CCDC40-202ENST00000374876 PREBQ9HCU5 417 aa14.99□□□□□ -0.01
CCDC40-202ENST00000374876 TRPM6Q9BX84 2022 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 TRBV5-3A0A0A0MS03 114 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 IGLON5A6NGN9 336 aa14.98□□□□□ -0.01
CCDC40-202ENST00000374876 C10orf142B7Z368 130 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms