RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 TMEM98Q9Y2Y6 226 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 H3BM21 787 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 SEC14L2O76054 403 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 CATP04040 527 aaKnown RBP16.45■□□□□ 0.22
RXRB-201ENST00000374680 CYP2A6P11509 494 aaPredicted RBP16.45■□□□□ 0.22
RXRB-201ENST00000374680 IRS1P35568 1242 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 VBP1P61758 197 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 MYBPC3Q14896 1274 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 NUMA1Q14980 2115 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 TCEA2Q15560 299 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 RBM48Q5RL73 367 aaKnown RBP16.45■□□□□ 0.22
RXRB-201ENST00000374680 ZNF691Q5VV52 312 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 AHSA2Q719I0 299 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 B3GNT8Q7Z7M8 397 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 TCAIMQ8N3R3 496 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 WDR48Q8TAF3 677 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 GLYATL1Q969I3 302 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 RC3H2Q9HBD1 1191 aaKnown RBP16.45■□□□□ 0.22
RXRB-201ENST00000374680 IL1RAPQ9NPH3 570 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 KRT84Q9NSB2 600 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 SCAMP1O15126 338 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 MMP20O60882 483 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 MOSPD3O75425 235 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 STATHP02808 62 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 GP2P55259 537 aaKnown RBP16.45■□□□□ 0.22
RXRB-201ENST00000374680 AP1S2P56377 157 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 RAE1P78406 368 aaKnown RBP16.45■□□□□ 0.22
RXRB-201ENST00000374680 UAP1L1Q3KQV9 507 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 METTL3Q86U44 580 aaKnown RBP16.45■□□□□ 0.22
RXRB-201ENST00000374680 WDR20Q8TBZ3 569 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 GLMNQ92990 594 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 ASPSCR1Q9BZE9 553 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 THUMPD1Q9NXG2 353 aaKnown RBP16.45■□□□□ 0.22
RXRB-201ENST00000374680 RHCGQ9UBD6 479 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 IL36AQ9UHA7 158 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.45■□□□□ 0.22
RXRB-201ENST00000374680 PPIL1Q9Y3C6 166 aa16.45■□□□□ 0.22
RXRB-201ENST00000374680 PRUNE2Q8WUY3 3088 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 ATG13O75143 517 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 CPNE6O95741 557 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 TTKP33981 857 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 SOAT1P35610 550 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 NUDT6P53370 316 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 RAET1GQ6H3X3 334 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 BRAT1Q6PJG6 821 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 LIPIQ6XZB0 460 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 PARS2Q7L3T8 475 aaKnown RBP16.44■□□□□ 0.22
RXRB-201ENST00000374680 DRAXINQ8NBI3 349 aaPredicted RBP16.44■□□□□ 0.22
RXRB-201ENST00000374680 ZNF420Q8TAQ5 688 aaPredicted RBP16.44■□□□□ 0.22
RXRB-201ENST00000374680 FNDC8Q8TC99 324 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 ZNF480Q8WV37 535 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 RPL3LQ92901 407 aaKnown RBP16.44■□□□□ 0.22
RXRB-201ENST00000374680 PLEKHA8Q96JA3 519 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 YTHDF1Q9BYJ9 559 aaKnown RBP16.44■□□□□ 0.22
RXRB-201ENST00000374680 REEP1Q9H902 201 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 ASIC5Q9NY37 505 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 SELENONQ9NZV5 590 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 PSME2Q9UL46 239 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 RTCAO00442 366 aaKnown RBP16.44■□□□□ 0.22
RXRB-201ENST00000374680 NDUFS2O75306 463 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 C6orf47O95873 294 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 HPRP00739 348 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 MPC1LP0DKB6 136 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 RRM2P31350 389 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 HNF4AP41235 474 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 SRSF11Q05519 484 aaKnown RBP16.44■□□□□ 0.22
RXRB-201ENST00000374680 SLBPQ14493 270 aaKnown RBP eCLIP16.44■□□□□ 0.22
RXRB-201ENST00000374680 SYT16Q17RD7 645 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 PERM1Q5SV97 790 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 HENMT1Q5T8I9 393 aaKnown RBP16.44■□□□□ 0.22
RXRB-201ENST00000374680 VN1R2Q8NFZ6 395 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 PJA1Q8NG27 643 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 RAD21L1Q9H4I0 556 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 C5AR2Q9P296 337 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 GULP1Q9UBP9 304 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 BLOC1S6Q9UL45 172 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 RUVBL1Q9Y265 456 aaKnown RBP16.44■□□□□ 0.22
RXRB-201ENST00000374680 SH3GLB1Q9Y371 365 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 SNX8Q9Y5X2 465 aa16.44■□□□□ 0.22
RXRB-201ENST00000374680 FAM20BO75063 409 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 SLCO2B1O94956 709 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 GSTM2P28161 218 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 SLC6A11P48066 632 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 TBPL1P62380 186 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 GBX1Q14549 363 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 NR1D2Q14995 579 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 ARHGEF6Q15052 776 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 TMEM236Q5W0B7 351 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 TBC1D23Q9NUY8 699 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 KCNE2Q9Y6J6 123 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 CCDC88CQ9P219 2028 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 SCN8AQ9UQD0 1980 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 A0A0G2JN53 185 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 BOLA2-SMG1P6H3BVE0 249 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 J3KTA2 159 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 GNRH1P01148 92 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 MT-ND2P03891 347 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 KLK1P06870 262 aa16.43■□□□□ 0.22
RXRB-201ENST00000374680 IDH2P48735 452 aaKnown RBP16.43■□□□□ 0.22
RXRB-201ENST00000374680 RPS26P62854 115 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms