RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 FAM214AQ32MH5 1076 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 XKR6Q5GH73 641 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 PAGE2BQ5JRK9 111 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 WASHC2DQ5SRD0 308 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 MANEAQ5SRI9 462 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 LIPMQ5VYY2 423 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 LIPJQ5W064 366 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 HIST2H2AA3Q6FI13 130 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 TMIGD1Q6UXZ0 262 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 VN1R4Q7Z5H5 301 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 PLD3Q8IV08 490 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 L3MBTL4Q8NA19 623 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 ZNF740Q8NDX6 193 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 PPP4R1Q8TF05 950 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 FGF11Q92914 225 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 UBE2E3Q969T4 207 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 RERGQ96A58 199 aaPredicted RBP10.86□□□□□ -0.67
HSPG2-202ENST00000374676 ARL8AQ96BM9 186 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 ZBTB9Q96C00 473 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 TM4SF19Q96DZ7 209 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 SEC16BQ96JE7 1060 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 LRFN5Q96NI6 719 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 TMEM237Q96Q45 408 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 SPNS1Q9H2V7 528 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 CCDC86Q9H6F5 360 aaKnown RBP10.86□□□□□ -0.67
HSPG2-202ENST00000374676 NOL11Q9H8H0 719 aaKnown RBP10.86□□□□□ -0.67
HSPG2-202ENST00000374676 SYNPO2LQ9H987 977 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 ZBTB26Q9HCK0 441 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 FOXJ2Q9P0K8 574 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 ZFP69BQ9UJL9 534 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 WDFY3Q8IZQ1 3526 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 SCN3AQ9NY46 2000 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 MAP1BP46821 2468 aaKnown RBP10.85□□□□□ -0.67
HSPG2-202ENST00000374676 OR7A17O14581 309 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ZSCAN9O15535 394 aaPredicted RBP10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ZNF749O43361 778 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 TRIM13O60858 407 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 CPNE3O75131 537 aaKnown RBP10.85□□□□□ -0.67
HSPG2-202ENST00000374676 KIAA0754O94854 1291 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 SUPT7LO94864 414 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ZWINTO95229 277 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 TIAF1O95411 115 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 CD22P20273 847 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 CCNG1P51959 295 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ARSFP54793 590 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ASPHQ12797 758 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 PWP1Q13610 501 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 MPP2Q14168 576 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 MAP7Q14244 749 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 SLBPQ14493 270 aaKnown RBP eCLIP10.85□□□□□ -0.67
HSPG2-202ENST00000374676 PCLAFQ15004 111 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 GARNL3Q5VVW2 1013 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 RHBDD2Q6NTF9 364 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ASPGQ86U10 573 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 TMEM126BQ8IUX1 230 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 C10orf107Q8IVU9 208 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 LAS2Q8IYD9 372 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ZNF655Q8N720 491 aaPredicted RBP10.85□□□□□ -0.67
HSPG2-202ENST00000374676 CSNK1A1LQ8N752 337 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 GOLGA6L1Q8N7Z2 621 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ANKRD53Q8N9V6 530 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 TTC29Q8NA56 475 aaPredicted RBP10.85□□□□□ -0.67
HSPG2-202ENST00000374676 CAMKVQ8NCB2 501 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 TRPV3Q8NET8 790 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 TTLQ8NG68 377 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 MDM1Q8TC05 714 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ATP6V1E2Q96A05 226 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ATP6V1G3Q96LB4 118 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 MAGEB10Q96LZ2 347 aaPredicted RBP10.85□□□□□ -0.67
HSPG2-202ENST00000374676 NSUN5Q96P11 429 aaKnown RBP10.85□□□□□ -0.67
HSPG2-202ENST00000374676 NLNQ9BYT8 704 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 RHBGQ9H310 441 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ACBD3Q9H3P7 528 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ACTR8Q9H981 624 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ACTR5Q9H9F9 607 aaPredicted RBP10.85□□□□□ -0.67
HSPG2-202ENST00000374676 KCNK9Q9NPC2 374 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ZNF446Q9NWS9 450 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 ZNF490Q9ULM2 529 aaPredicted RBP10.85□□□□□ -0.67
HSPG2-202ENST00000374676 SRPK3Q9UPE1 567 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 STK38LQ9Y2H1 464 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 TSC22D4Q9Y3Q8 395 aa10.85□□□□□ -0.67
HSPG2-202ENST00000374676 CCDC88CQ9P219 2028 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 HYKKA2RU49 373 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 H0YIV9 168 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 STMND1H3BQB6 276 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 BIRC5O15392 142 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 ATP8B1O43520 1251 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 STK17BO94768 372 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 CLDN9O95484 217 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 MLYCDO95822 493 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 OTCP00480 354 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 NTRK1P04629 796 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 EIF2S1P05198 315 aaKnown RBP10.84□□□□□ -0.67
HSPG2-202ENST00000374676 BPGMP07738 259 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 DHRS4L1P0CG22 281 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 ZNF28P17035 718 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 ALDH3A1P30838 453 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 SERPINB4P48594 390 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 NAGLUP54802 743 aa10.84□□□□□ -0.67
HSPG2-202ENST00000374676 CDH13P55290 713 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms