RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 ULK4Q96C45 1275 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 WRAP53Q9BUR4 548 aaKnown RBP16.36■□□□□ 0.21
PHF1-202ENST00000374516 CD244Q9BZW8 370 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 IGFLR1Q9H665 355 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 MAGIXQ9H6Y5 334 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 OPTCQ9UBM4 332 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 ZNF229Q9UJW7 825 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 PLXNB3Q9ULL4 1909 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 FADS2P1A8MWK0 482 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 FFAR3O14843 346 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 GPR42O15529 346 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 SLC2A4P14672 509 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 AOAHP28039 575 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 PSMB9P28065 219 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 SERPINB1P30740 379 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 RPIAP49247 311 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 HNRNPFP52597 415 aaKnown RBP16.36■□□□□ 0.21
PHF1-202ENST00000374516 TRAF3Q13114 568 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 PTGR1Q14914 329 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 FAM174BQ3ZCQ3 159 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 CCDC81Q6ZN84 652 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 GET4Q7L5D6 327 aaPredicted RBP16.36■□□□□ 0.21
PHF1-202ENST00000374516 GALNT5Q7Z7M9 940 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 CYP4Z1Q86W10 505 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 LACC1Q8IV20 430 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 CHPFQ8IZ52 775 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 SETD9Q8NE22 299 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 PSMA8Q8TAA3 256 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 ASB16Q96NS5 453 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 SH3GL1Q99961 368 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 DSN1Q9H410 356 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 CPNE5Q9HCH3 593 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 THG1LQ9NWX6 298 aaKnown RBP16.36■□□□□ 0.21
PHF1-202ENST00000374516 ARL15Q9NXU5 204 aa16.36■□□□□ 0.21
PHF1-202ENST00000374516 HOXC11O43248 304 aaPredicted RBP16.35■□□□□ 0.21
PHF1-202ENST00000374516 OTCP00480 354 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 MASP1P48740 699 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 CXCR4P61073 352 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 SIM2Q14190 667 aaPredicted RBP16.35■□□□□ 0.21
PHF1-202ENST00000374516 RUNDC3AQ59EK9 446 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 LAIR1Q6GTX8 287 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 PARS2Q7L3T8 475 aaKnown RBP16.35■□□□□ 0.21
PHF1-202ENST00000374516 MICU2Q8IYU8 434 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 NETO1Q8TDF5 533 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 DACH2Q96NX9 599 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 ZBTB18Q99592 522 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 EHD1Q9H4M9 534 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 SP140LQ9H930 580 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 SCN3BQ9NY72 215 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 SERPINA1P01009 418 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 SRPRAP08240 638 aaKnown RBP16.35■□□□□ 0.21
PHF1-202ENST00000374516 IGFBP5P24593 272 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 CD40LGP29965 261 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 ERVK-21P61565 698 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 SLC13A2Q13183 592 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 GBX1Q14549 363 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 PDE12Q6L8Q7 609 aaKnown RBP16.35■□□□□ 0.21
PHF1-202ENST00000374516 GCNT7Q6ZNI0 430 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 UBE2R2Q712K3 238 aaPredicted RBP16.35■□□□□ 0.21
PHF1-202ENST00000374516 PRSS48Q7RTY5 328 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 ETFBKMTQ8IXQ9 262 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 PHACTR4Q8IZ21 702 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 NCLNQ969V3 563 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 RMI1Q9H9A7 625 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 FARSBQ9NSD9 589 aaKnown RBP16.35■□□□□ 0.21
PHF1-202ENST00000374516 OSGIN1Q9UJX0 560 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 CCL27Q9Y4X3 112 aa16.35■□□□□ 0.21
PHF1-202ENST00000374516 HEPACAM2A8MVW5 462 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 PLK4O00444 970 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 ELFN1P0C7U0 828 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 RCVRNP35243 200 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 SF3B4Q15427 424 aaKnown RBP eCLIP16.34■□□□□ 0.214e-19■■■■■ 37.3
PHF1-202ENST00000374516 ZXDCQ2QGD7 858 aaPredicted RBP16.34■□□□□ 0.21
PHF1-202ENST00000374516 FNDC3BQ53EP0 1204 aaKnown RBP16.34■□□□□ 0.21
PHF1-202ENST00000374516 SGO1Q5FBB7 561 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 RPL3LQ92901 407 aaKnown RBP16.34■□□□□ 0.21
PHF1-202ENST00000374516 SMARCD2Q92925 531 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 PPP3R2Q96LZ3 170 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 KAT8Q9H7Z6 458 aaKnown RBP16.34■□□□□ 0.21
PHF1-202ENST00000374516 SIAEQ9HAT2 523 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 ACOT13Q9NPJ3 140 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 DEC1Q9P2X7 70 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 ISPDA4D126 451 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 TMEM202A6NGA9 273 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 A8MU76 341 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 UPK1BO75841 260 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 PGRP06401 933 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 CBSLP0DN79 551 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 CBSP35520 551 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 EIF2DP41214 584 aaKnown RBP16.34■□□□□ 0.21
PHF1-202ENST00000374516 CLK3P49761 638 aaKnown RBP16.34■□□□□ 0.21
PHF1-202ENST00000374516 RPL38P63173 70 aaKnown RBP16.34■□□□□ 0.21
PHF1-202ENST00000374516 GAB4Q2WGN9 574 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 SPANXN4Q5MJ08 99 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 HENMT1Q5T8I9 393 aaKnown RBP16.34■□□□□ 0.21
PHF1-202ENST00000374516 CPZQ66K79 652 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 SHQ1Q6PI26 577 aaKnown RBP16.34■□□□□ 0.21
PHF1-202ENST00000374516 DNAJC14Q6Y2X3 702 aaPredicted RBP16.34■□□□□ 0.21
PHF1-202ENST00000374516 ZNF540Q8NDQ6 660 aa16.34■□□□□ 0.21
PHF1-202ENST00000374516 OR10Q1Q8NGQ4 319 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms