RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ESRRGP62508 458 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 GTF2H3Q13889 308 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 DAG1Q14118 895 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 GAS6Q14393 721 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 PLCL1Q15111 1095 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 SF1Q15637 639 aaKnown RBP11.67□□□□□ -0.54
HMGCL-202ENST00000374487 BORAQ6PGQ7 559 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 ZNF852Q6ZMS4 543 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 TRMT11Q7Z4G4 463 aaKnown RBP11.67□□□□□ -0.54
HMGCL-202ENST00000374487 NLRP8Q86W28 1048 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 ETFBKMTQ8IXQ9 262 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 KIAA1958Q8N8K9 716 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 OR56A3Q8NH54 315 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 RBM38Q9H0Z9 239 aaKnown RBP11.67□□□□□ -0.54
HMGCL-202ENST00000374487 BRF2Q9HAW0 419 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 TRPV5Q9NQA5 729 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 PTTG2Q9NZH5 202 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 H0YAE9 185 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 CLIC1O00299 241 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 PLK4O00444 970 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 E2F6O75461 281 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 BMP10O95393 424 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 CPSF4O95639 269 aaKnown RBP11.66□□□□□ -0.54
HMGCL-202ENST00000374487 ALPLP05186 524 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 C6P13671 934 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 ADRB3P13945 408 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 PTPN6P29350 595 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 VAC14Q08AM6 782 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 MTAPQ13126 283 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 LSAMPQ13449 338 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 NKG7Q16617 165 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 CAPN13Q6MZZ7 669 aaPredicted RBP11.66□□□□□ -0.54
HMGCL-202ENST00000374487 FKBP9P1Q75LS8 142 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 TMPRSS11BQ86T26 416 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 C10orf111Q8N326 155 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 PRSS33Q8NF86 280 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 OR7G3Q8NG95 312 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 STARD8Q92502 1023 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 NEIL2Q969S2 332 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 ARRDC3Q96B67 414 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 METTL2AQ96IZ6 378 aaKnown RBP11.66□□□□□ -0.54
HMGCL-202ENST00000374487 MPP4Q96JB8 637 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 FCRL1Q96LA6 429 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 LMAN1LQ9HAT1 526 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 TUBA8Q9NY65 449 aaPredicted RBP11.66□□□□□ -0.54
HMGCL-202ENST00000374487 MAGED1Q9Y5V3 778 aaPredicted RBP11.66□□□□□ -0.54
HMGCL-202ENST00000374487 F5P12259 2224 aa11.66□□□□□ -0.54
HMGCL-202ENST00000374487 GNG14A0A1W2PPG7 69 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 TBC1D3BA6NDS4 549 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 NPC1O15118 1278 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 SPINT1O43278 529 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 EPN2O95208 641 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 SOD1P00441 154 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 EGFP01133 1207 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ANXA4P09525 319 aaPredicted RBP11.65□□□□□ -0.54
HMGCL-202ENST00000374487 THRBP10828 461 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 HOXB6P17509 224 aaKnown RBP11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ENGP17813 658 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 OPRD1P41143 372 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 GZMMP51124 257 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 IST1P53990 364 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ADARB1P78563 741 aaKnown RBP11.65□□□□□ -0.54
HMGCL-202ENST00000374487 LAPTM5Q13571 262 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 STARD3Q14849 445 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 EIF4HQ15056 248 aaKnown RBP11.65□□□□□ -0.54
HMGCL-202ENST00000374487 PDGFRLQ15198 375 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 UGT8Q16880 541 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 BCL7AQ4VC05 210 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ZCCHC8Q6NZY4 707 aaKnown RBP11.65□□□□□ -0.54
HMGCL-202ENST00000374487 MED27Q6P2C8 311 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 SVOPLQ8N434 492 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 C1orf52Q8N6N3 182 aaKnown RBP11.65□□□□□ -0.54
HMGCL-202ENST00000374487 VPS37AQ8NEZ2 397 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 OR8J2Q8NGG1 315 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 HUS1BQ8NHY5 278 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ZNF480Q8WV37 535 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 REPS1Q96D71 796 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ERLEC1Q96DZ1 483 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 PYURFQ96I23 114 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ZNF514Q96K75 400 aaPredicted RBP11.65□□□□□ -0.54
HMGCL-202ENST00000374487 MAGIXQ9H6Y5 334 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 TRIM39Q9HCM9 518 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 AASDHPPTQ9NRN7 309 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 FAM120CQ9NX05 1096 aaKnown RBP11.65□□□□□ -0.54
HMGCL-202ENST00000374487 GULP1Q9UBP9 304 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 MGAT4DA6NG13 374 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 CCNDBP1O95273 360 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ZNF682O95780 498 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 CHRNB1P11230 501 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 CDH2P19022 906 aaPredicted RBP11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ASMTP46597 345 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ALDH3B2P48448 385 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 CCR3P51677 355 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 TBPL1P62380 186 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 PCDH1Q08174 1060 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 DYNC1I2Q13409 638 aaKnown RBP11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ZNF234Q14588 700 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 SPIN4Q56A73 249 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ADNP2Q6IQ32 1131 aa11.65□□□□□ -0.54
HMGCL-202ENST00000374487 ANKRD26P1Q6NSI1 321 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms