RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 H3BQ06 376 aaPredicted RBP10.44□□□□□ -0.74
CXCL12-203ENST00000374429 ETFAP13804 333 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 DDX5P17844 614 aaKnown RBP10.44□□□□□ -0.74
CXCL12-203ENST00000374429 PFKLP17858 780 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 RAB8AP61006 207 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 CAMK2BQ13554 666 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 CAMK1Q14012 370 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 USP39Q53GS9 565 aaKnown RBP10.44□□□□□ -0.74
CXCL12-203ENST00000374429 XKR5Q6UX68 686 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 DLEU7Q6UYE1 221 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 BTN2A2Q8WVV5 523 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 NELL1Q92832 810 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 GTPBP3Q969Y2 492 aaKnown RBP10.44□□□□□ -0.74
CXCL12-203ENST00000374429 ARRDC3Q96B67 414 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 THAP11Q96EK4 314 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 REXO5Q96IC2 774 aaKnown RBP10.44□□□□□ -0.74
CXCL12-203ENST00000374429 RHNO1Q9BSD3 238 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 C9orf16Q9BUW7 83 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 TOR3AQ9H497 397 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 SLC28A3Q9HAS3 691 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 POPDC3Q9HBV1 291 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 TBC1D14Q9P2M4 693 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 SERGEFQ9UGK8 458 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 DPP7Q9UHL4 492 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.44□□□□□ -0.74
CXCL12-203ENST00000374429 HS3ST2Q9Y278 367 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 FAM32AQ9Y421 112 aaKnown RBP10.44□□□□□ -0.74
CXCL12-203ENST00000374429 BBIP1A8MTZ0 92 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 H0Y8X5 98 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 OR1F1O43749 312 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 CREG1O75629 220 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 WISP3O95389 354 aaPredicted RBP10.44□□□□□ -0.74
CXCL12-203ENST00000374429 C6orf47O95873 294 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 STT3AP46977 705 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 SMN1Q16637 294 aaKnown RBP10.44□□□□□ -0.74
CXCL12-203ENST00000374429 CMPK2Q5EBM0 449 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 ALG1LQ6GMV1 187 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 GPR141Q7Z602 305 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 MICU2Q8IYU8 434 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 NLGN4XQ8N0W4 816 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 MINDY1Q8N5J2 469 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 PEX13Q92968 403 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 CD93Q9NPY3 652 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 SMPD3Q9NY59 655 aaPredicted RBP10.44□□□□□ -0.74
CXCL12-203ENST00000374429 PDP1Q9P0J1 537 aaPredicted RBP10.44□□□□□ -0.74
CXCL12-203ENST00000374429 SLC23A2Q9UGH3 650 aa10.44□□□□□ -0.74
CXCL12-203ENST00000374429 CACNA1EQ15878 2313 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 KNTC1P50748 2209 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 NOTOA8MTQ0 251 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 PCDH7O60245 1069 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 EBLN1P0CF75 366 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 EPHA2P29317 976 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 PRMT2P55345 433 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 RELAQ04206 551 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 SGCGQ13326 291 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 PPP2R2DQ66LE6 453 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 BRAT1Q6PJG6 821 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 KLHL17Q6TDP4 642 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 ZDHHC21Q8IVQ6 265 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 KLHDC8BQ8IXV7 354 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 OR7G3Q8NG95 312 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 ZNF480Q8WV37 535 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 NCSTNQ92542 709 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 TFGQ92734 400 aaPredicted RBP10.43□□□□□ -0.74
CXCL12-203ENST00000374429 C12orf66Q96MD2 445 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 OSBPL11Q9BXB4 747 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 NUSAP1Q9BXS6 441 aaKnown RBP10.43□□□□□ -0.74
CXCL12-203ENST00000374429 RMND5AQ9H871 391 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 PTPRDP23468 1912 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 EEDO75530 441 aaKnown RBP10.43□□□□□ -0.74
CXCL12-203ENST00000374429 H6PDO95479 791 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 CDK4P11802 303 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 ID2Q02363 134 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 GALNT1Q10472 559 aaPredicted RBP10.43□□□□□ -0.74
CXCL12-203ENST00000374429 PPIGQ13427 754 aaKnown RBP eCLIP10.43□□□□□ -0.74
CXCL12-203ENST00000374429 C5orf22Q49AR2 442 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 PRMT9Q6P2P2 845 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 MACC1Q6ZN28 852 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 ZNF551Q7Z340 670 aaPredicted RBP10.43□□□□□ -0.74
CXCL12-203ENST00000374429 TMEM145Q8NBT3 493 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 UCN3Q969E3 161 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 OR4K3Q96R72 315 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 FANCEQ9HB96 536 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 FAIMQ9NVQ4 179 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 CUEDC1Q9NWM3 386 aaPredicted RBP10.43□□□□□ -0.74
CXCL12-203ENST00000374429 SATB2Q9UPW6 733 aa10.43□□□□□ -0.74
CXCL12-203ENST00000374429 TCRBV3S1A0A5B6 114 aa10.42□□□□□ -0.74
CXCL12-203ENST00000374429 FAM227AF5H4B4 570 aa10.42□□□□□ -0.74
CXCL12-203ENST00000374429 AREL1O15033 823 aa10.42□□□□□ -0.74
CXCL12-203ENST00000374429 NOL3O60936 208 aaKnown RBP10.42□□□□□ -0.74
CXCL12-203ENST00000374429 PSMB9P28065 219 aa10.42□□□□□ -0.74
CXCL12-203ENST00000374429 PFN3P60673 137 aa10.42□□□□□ -0.74
CXCL12-203ENST00000374429 BNIP2Q12982 314 aa10.42□□□□□ -0.74
CXCL12-203ENST00000374429 PON2Q15165 354 aa10.42□□□□□ -0.74
CXCL12-203ENST00000374429 SHHQ15465 462 aa10.42□□□□□ -0.74
CXCL12-203ENST00000374429 XKR7Q5GH72 579 aa10.42□□□□□ -0.74
CXCL12-203ENST00000374429 FGD3Q5JSP0 725 aa10.42□□□□□ -0.74
CXCL12-203ENST00000374429 FAM83HQ6ZRV2 1179 aaPredicted RBP10.42□□□□□ -0.74
CXCL12-203ENST00000374429 KCTD8Q6ZWB6 473 aa10.42□□□□□ -0.74
CXCL12-203ENST00000374429 TMEFF1Q8IYR6 380 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms