RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 PLXNB3Q9ULL4 1909 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 FAM234BA2RU67 622 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 OR7A17O14581 309 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 TRIM16O95361 564 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 NPPAP01160 153 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 CAPN1P07384 714 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 SLC6A2P23975 617 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 NSG1P42857 185 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 ZFP36L2P47974 494 aaKnown RBP13.8□□□□□ -0.2
HMGA1-203ENST00000374116 NEK2P51955 445 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 POLR2JP52435 117 aaKnown RBP13.8□□□□□ -0.2
HMGA1-203ENST00000374116 CDK3Q00526 305 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 DPTQ07507 201 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 RGS21Q2M5E4 152 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 PLA2G2CQ5R387 149 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 SCIMPQ6UWF3 145 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 ENPP7Q6UWV6 458 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 ISLR2Q6UXK2 745 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 CYP2R1Q6VVX0 501 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 RD3Q7Z3Z2 195 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 NRSN1Q8IZ57 195 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 MFSD2AQ8NA29 543 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 DENND6BQ8NEG7 585 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 THAP11Q96EK4 314 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 LOXL4Q96JB6 756 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 GTPBP2Q9BX10 602 aaKnown RBP13.8□□□□□ -0.2
HMGA1-203ENST00000374116 ARMC1Q9NVT9 282 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 TRNAU1APQ9NX07 287 aaKnown RBP13.8□□□□□ -0.2
HMGA1-203ENST00000374116 KLF15Q9UIH9 416 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 MOSPD1Q9UJG1 213 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 LEF1Q9UJU2 399 aaPredicted RBP13.8□□□□□ -0.2
HMGA1-203ENST00000374116 DOLKQ9UPQ8 538 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 PCDHA9Q9Y5H5 950 aa13.8□□□□□ -0.2
HMGA1-203ENST00000374116 CCDC154A6NI56 674 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 TPD52L2O43399 206 aaKnown RBP13.79□□□□□ -0.2
HMGA1-203ENST00000374116 OXSR1O95747 527 aaPredicted RBP13.79□□□□□ -0.2
HMGA1-203ENST00000374116 TFPTP0C1Z6 253 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 CBSLP0DN79 551 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 ITGB6P18564 788 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 MSH3P20585 1137 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 CBSP35520 551 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 TRIM23P36406 574 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 ARL1P40616 181 aaPredicted RBP13.79□□□□□ -0.2
HMGA1-203ENST00000374116 UFM1P61960 85 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 EMX2Q04743 252 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 NFYCQ13952 458 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 TTLL9Q3SXZ7 439 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 SULT1C3Q6IMI6 304 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 KRT80Q6KB66 452 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 Q6ZSR9 355 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 GALNT4Q8N4A0 578 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 PACRGLQ8N7B6 248 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 FNDC5Q8NAU1 212 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 OR4F6Q8NGB9 312 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 UBTD2Q8WUN7 234 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 LRTOMTQ8WZ04 291 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 TSACCQ96A04 125 aaPredicted RBP13.79□□□□□ -0.2
HMGA1-203ENST00000374116 CDK15Q96Q40 435 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 TCEAL2Q9H3H9 227 aaPredicted RBP13.79□□□□□ -0.2
HMGA1-203ENST00000374116 IPPKQ9H8X2 491 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 RDH14Q9HBH5 336 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 CAPN10Q9HC96 672 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 SEMA4GQ9NTN9 838 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 SMOXQ9NWM0 555 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 CMTM6Q9NX76 183 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 SUSD2Q9UGT4 822 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 TSC22D4Q9Y3Q8 395 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 PRKAB1Q9Y478 270 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 PCYT1BQ9Y5K3 369 aaPredicted RBP13.79□□□□□ -0.2
HMGA1-203ENST00000374116 CFAP54Q96N23 3096 aa13.79□□□□□ -0.2
HMGA1-203ENST00000374116 LNP1A1A4G5 178 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 C9JVG2 144 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 H3BMQ9 156 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 IFRD1O00458 451 aaPredicted RBP13.78□□□□□ -0.2
HMGA1-203ENST00000374116 AQP9O43315 295 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 GDF9O60383 454 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 SDC3O75056 442 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 NUDT1P36639 197 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 GRIA3P42263 894 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 EIF2B2P49770 351 aaKnown RBP13.78□□□□□ -0.2
HMGA1-203ENST00000374116 DCDC1P59894 354 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 FZD2Q14332 565 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 GBX1Q14549 363 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 C18orf21Q32NC0 220 aaPredicted RBP13.78□□□□□ -0.2
HMGA1-203ENST00000374116 LCN8Q6JVE9 175 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 SLC23A3Q6PIS1 610 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 IL27RAQ6UWB1 636 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 RNF165Q6ZSG1 346 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 MILR1Q7Z6M3 343 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 TRAM1L1Q8N609 369 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 TMEM125Q96AQ2 219 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 ULK4Q96C45 1275 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 TEX37Q96LM6 180 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 COG8Q96MW5 612 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 C1orf50Q9BV19 199 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 CCM2LQ9NUG4 571 aaPredicted RBP13.78□□□□□ -0.2
HMGA1-203ENST00000374116 KCTD5Q9NXV2 234 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 ACTR3BQ9P1U1 418 aa13.78□□□□□ -0.2
HMGA1-203ENST00000374116 NFKBIL1Q9UBC1 381 aaPredicted RBP13.78□□□□□ -0.2
HMGA1-203ENST00000374116 PCDHGA5Q9Y5G8 931 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms