RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 ABCB7O75027 752 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 CYB5AP00167 134 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 PRKCGP05129 697 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 DDX6P26196 483 aaKnown RBP eCLIP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 GDI2P50395 445 aaKnown RBP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 ZNF45Q02386 682 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 SLBPQ14493 270 aaKnown RBP eCLIP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 MS4A13Q5J8X5 152 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 UBAP2Q5T6F2 1119 aaKnown RBP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 GDPD4Q6W3E5 623 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 KCNA7Q96RP8 456 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 CLCA1A8K7I4 914 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 B3GALT2O43825 422 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 PCDHGA12O60330 932 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 ATP1B2P14415 290 aaPredicted RBP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 CCR8P51685 355 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 CASP9P55211 416 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 LRRC73Q5JTD7 316 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 RPS27LQ71UM5 84 aaKnown RBP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 C5orf34Q96MH7 638 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 TMEM74Q96NL1 305 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 CCM2Q9BSQ5 444 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 FUZQ9BT04 418 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 RPF2Q9H7B2 306 aaKnown RBP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 EBLN1P0CF75 366 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 MLLT6P55198 1093 aaPredicted RBP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 ZNF404Q494X3 552 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 ASB18Q6ZVZ8 466 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 TIGD4Q8IY51 512 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 TTLQ8NG68 377 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 C1orf216Q8TAB5 229 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 LCN9Q8WX39 176 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 CMTM7Q96FZ5 175 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 LRCH3Q96II8 777 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 EFCAB11Q9BUY7 163 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 RIOK2Q9BVS4 552 aaKnown RBP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 SLC39A1Q9NY26 324 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 P2RX2Q9UBL9 471 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 SLC45A1Q9Y2W3 748 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 Q9Y3F1 56 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 ZNF451Q9Y4E5 1061 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 LOC730098B7Z3J9 87 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 RASGRP1O95267 797 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 PROZP22891 400 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 HTR2AP28223 471 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 SEMA3AQ14563 771 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 ZNF423Q2M1K9 1284 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 DEFB115Q30KQ5 88 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 CYP4V2Q6ZWL3 525 aaPredicted RBP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 GHDCQ8N2G8 530 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 TXNDC5Q8NBS9 432 aaKnown RBP13.81□□□□□ -0.2
LMX1B-202ENST00000373474 ZMIZ2Q8NF64 920 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 OR14C36Q8NHC7 312 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 MAPKAP1Q9BPZ7 522 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 IFT27Q9BW83 186 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 MIR1-1HGQ9H1L0 117 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 MEAF6Q9HAF1 191 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 SEC14L4Q9UDX3 406 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 KCTD3Q9Y597 815 aa13.81□□□□□ -0.2
LMX1B-202ENST00000373474 MATN4O95460 622 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 PRAMEF12O95522 483 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 PENKP01210 267 aaPredicted RBP13.8□□□□□ -0.2
LMX1B-202ENST00000373474 TACSTD2P09758 323 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 FPR1P21462 350 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 PSMA6P60900 246 aaKnown RBP13.8□□□□□ -0.2
LMX1B-202ENST00000373474 PRKCDQ05655 676 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 SIX1Q15475 284 aaPredicted RBP13.8□□□□□ -0.2
LMX1B-202ENST00000373474 SMARCD3Q6STE5 483 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 TXLNGYQ9BZA5 131 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 TMEM184CQ9NVA4 438 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 MYH6P13533 1939 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 BAZ2AQ9UIF9 1905 aaKnown RBP13.8□□□□□ -0.2
LMX1B-202ENST00000373474 KDM4FA0A1W2PPD8 638 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 GLTPD2A6NH11 291 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 PIRO00625 290 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 DLGAP1O14490 977 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 THOC6Q86W42 341 aaKnown RBP13.8□□□□□ -0.2
LMX1B-202ENST00000373474 PYCR2Q96C36 320 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 ZNF514Q96K75 400 aaPredicted RBP13.8□□□□□ -0.2
LMX1B-202ENST00000373474 HSPA12BQ96MM6 686 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 PHOX2BQ99453 314 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 PADI2Q9Y2J8 665 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 ANKRD66B4E2M5 251 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 HMGN1P05114 100 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 RPS3P23396 243 aaKnown RBP eCLIP13.8□□□□□ -0.2
LMX1B-202ENST00000373474 CD40LGP29965 261 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 SNAP47Q5SQN1 464 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 TMEM53Q6P2H8 277 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 NUDT13Q86X67 352 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 HDAC2Q92769 488 aaKnown RBP13.8□□□□□ -0.2
LMX1B-202ENST00000373474 VRTNQ9H8Y1 702 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 RIMKLBQ9ULI2 386 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 SLC33A1O00400 549 aaPredicted RBP13.8□□□□□ -0.2
LMX1B-202ENST00000373474 CLDN4O14493 209 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 DCKP27707 260 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 PLA2G16P53816 162 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 SEMG2Q02383 582 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 ATP6AP1Q15904 470 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 ZNF181Q2M3W8 571 aa13.8□□□□□ -0.2
LMX1B-202ENST00000373474 SLC44A3Q8N4M1 653 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms