RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 C2orf27AQ580R0 203 aa11.22□□□□□ -0.61
VCL-202ENST00000372755 NCBP2-AS2Q69YL0 99 aa11.22□□□□□ -0.61
VCL-202ENST00000372755 ERI1Q8IV48 349 aaKnown RBP11.22□□□□□ -0.61
VCL-202ENST00000372755 SMG8Q8ND04 991 aaKnown RBP11.22□□□□□ -0.61
VCL-202ENST00000372755 CLEC4DQ8WXI8 215 aa11.22□□□□□ -0.61
VCL-202ENST00000372755 PKP4Q99569 1192 aa11.22□□□□□ -0.61
VCL-202ENST00000372755 RMI1Q9H9A7 625 aa11.22□□□□□ -0.61
VCL-202ENST00000372755 TMEM5Q9Y2B1 443 aa11.22□□□□□ -0.61
VCL-202ENST00000372755 COL3A1P02461 1466 aaPredicted RBP11.22□□□□□ -0.61
VCL-202ENST00000372755 TEX13DA0A0J9YY54 714 aaPredicted RBP11.21□□□□□ -0.61
VCL-202ENST00000372755 OR51F1A6NGY5 319 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 C9IYK1 514 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 J3QLW9 94 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 ZNF19P17023 458 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 GJA9P57773 515 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 RPS24P62847 133 aaKnown RBP11.21□□□□□ -0.61
VCL-202ENST00000372755 NFATC2Q13469 925 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 RAB12Q6IQ22 244 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 TMIEQ8NEW7 156 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 THEM6Q8WUY1 208 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 EBF4Q9BQW3 602 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 ORAI3Q9BRQ5 295 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 TMED9Q9BVK6 235 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 ZNF350Q9GZX5 532 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 TREM1Q9NP99 234 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 DMAC2Q9NW81 257 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 DKKL1Q9UK85 242 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 NEMP2A6NFY4 417 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 NRP1O14786 923 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 PRKCGP05129 697 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 BDKRB1P46663 353 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 MYLK3Q32MK0 819 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 NIPAL1Q6NVV3 410 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 NCEH1Q6PIU2 408 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 LYSMD3Q7Z3D4 306 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 ZNF598Q86UK7 904 aaKnown RBP11.21□□□□□ -0.61
VCL-202ENST00000372755 NAT8LQ8N9F0 302 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 OR6N1Q8NGY5 312 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 CAPNS2Q96L46 248 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.21□□□□□ -0.61
VCL-202ENST00000372755 RDH8Q9NYR8 311 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 PPM1HQ9ULR3 514 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 ABCG2Q9UNQ0 655 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 A0A0G2JLL6 359 aaPredicted RBP11.21□□□□□ -0.61
VCL-202ENST00000372755 UPK3BL1B0FP48 263 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 UPK3BL2E5RIL1 263 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 TSTQ16762 297 aaKnown RBP11.21□□□□□ -0.61
VCL-202ENST00000372755 CNPY1Q3B7I2 92 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 TPRG1LQ5T0D9 272 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 PRRT2Q7Z6L0 340 aaPredicted RBP11.21□□□□□ -0.61
VCL-202ENST00000372755 NINJ1Q92982 152 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 TCEAL3Q969E4 200 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 CCDC120Q96HB5 630 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 TMEM168Q9H0V1 697 aa11.21□□□□□ -0.61
VCL-202ENST00000372755 CCDC86Q9H6F5 360 aaKnown RBP11.21□□□□□ -0.61
VCL-202ENST00000372755 FXYD6-FXYD2A0A087WZ82 144 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 YES1P07947 543 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 FPR1P21462 350 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 PTGS2P35354 604 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 HERV-K104P61576 105 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 SEMG2Q02383 582 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 SLC3A1Q07837 685 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 SLC36A4Q6YBV0 504 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 PYURFQ96I23 114 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 SUSD3Q96L08 255 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 LPIN3Q9BQK8 851 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 FXYD6Q9H0Q3 95 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 TDP1Q9NUW8 608 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 GNG8Q9UK08 70 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 SLC22A14Q9Y267 594 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 SH3D21A4FU49 640 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 TMEM63AO94886 807 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 VNN1O95497 513 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 GRIA1P42261 906 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 GJA8P48165 433 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 GNG2P59768 71 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 CRHR2Q13324 411 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 EFR3AQ14156 821 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 CDK10Q15131 360 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 CDKL4Q5MAI5 379 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 FBXL22Q6P050 247 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 GOLGA7Q7Z5G4 137 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 FUZQ9BT04 418 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 BTBD1Q9H0C5 482 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 LDAHQ9H6V9 325 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 PTGES2Q9H7Z7 377 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 TAS2R1Q9NYW7 299 aa11.21□□□□□ -0.62
VCL-202ENST00000372755 OPN1SWP03999 348 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 F8A1P23610 371 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 RHEBQ15382 184 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 FAM46DQ8NEK8 389 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 TMEM80Q96HE8 168 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 TTYH2Q9BSA4 534 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 TMEM121BQ9BXQ6 578 aaPredicted RBP11.2□□□□□ -0.62
VCL-202ENST00000372755 UCKL1Q9NWZ5 548 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 NLGN3Q9NZ94 848 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 OAZ3Q9UMX2 235 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 M0R036 132 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 DNM1LO00429 736 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 POP7O75817 140 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms