RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 SPRED1Q7Z699 444 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 THOC6Q86W42 341 aaKnown RBP13.59□□□□□ -0.23
LDB3-204ENST00000372066 TMEM132CQ8N3T6 1108 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 BEND7Q8N7W2 519 aaPredicted RBP13.59□□□□□ -0.23
LDB3-204ENST00000372066 OR56A3Q8NH54 315 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 TOE1Q96GM8 510 aaKnown RBP13.59□□□□□ -0.23
LDB3-204ENST00000372066 ITCHQ96J02 903 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 LINC00615Q96LM1 132 aaPredicted RBP13.59□□□□□ -0.23
LDB3-204ENST00000372066 CNBD2Q96M20 576 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 CAMK1GQ96NX5 476 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 OR52E6Q96RD3 313 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 CIB1Q99828 191 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 ANKRD60Q9BZ19 345 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 DYRK4Q9NR20 520 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 SLAMF8Q9P0V8 285 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 STOX2Q9P2F5 926 aaPredicted RBP13.59□□□□□ -0.23
LDB3-204ENST00000372066 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.59□□□□□ -0.23
LDB3-204ENST00000372066 ZNHIT2Q9UHR6 403 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 SUFUQ9UMX1 484 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 TRBV5-3A0A0A0MS03 114 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 C17orf113A0A1B0GUU1 675 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 FAM220BPB1ANY3 271 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 VEGFDO43915 354 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 SCELO95171 688 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 LDLRP01130 860 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 MTHFD1P11586 935 aaKnown RBP13.58□□□□□ -0.23
LDB3-204ENST00000372066 AMD1P17707 334 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 PRPS1L1P21108 318 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 OXTRP30559 389 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 SH3BGRP55822 239 aaPredicted RBP13.58□□□□□ -0.23
LDB3-204ENST00000372066 OR4D2P58180 307 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 SLC14A1Q13336 389 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 TRIP6Q15654 476 aaKnown RBP13.58□□□□□ -0.23
LDB3-204ENST00000372066 ZNF658BQ4V348 819 aaPredicted RBP13.58□□□□□ -0.23
LDB3-204ENST00000372066 LIN52Q52LA3 116 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 FAM98BQ52LJ0 330 aaKnown RBP13.58□□□□□ -0.23
LDB3-204ENST00000372066 TMEM220Q6QAJ8 160 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 CARM1Q86X55 608 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 OR2T12Q8NG77 320 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 BIRC7Q96CA5 298 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 REPS1Q96D71 796 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 BDH2Q9BUT1 245 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 GPR174Q9BXC1 333 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 UGT2B28Q9BY64 529 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 MIR1-1HGQ9H1L0 117 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 TMEM245Q9H330 911 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 MTG2Q9H4K7 406 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 RPF2Q9H7B2 306 aaKnown RBP13.58□□□□□ -0.23
LDB3-204ENST00000372066 ITM2CQ9NQX7 267 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 PNPLA3Q9NST1 481 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 WSB2Q9NYS7 404 aaPredicted RBP13.58□□□□□ -0.23
LDB3-204ENST00000372066 VAPAQ9P0L0 249 aa13.58□□□□□ -0.23
LDB3-204ENST00000372066 THAP10Q9P2Z0 257 aaPredicted RBP13.58□□□□□ -0.23
LDB3-204ENST00000372066 RUVBL1Q9Y265 456 aaKnown RBP13.58□□□□□ -0.23
LDB3-204ENST00000372066 CACNA1EQ15878 2313 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 C7orf72A4D263 438 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 H3BM21 787 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 NPC1O15118 1278 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 SPINT1O43278 529 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 DFNA5O60443 496 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 MYO1DO94832 1006 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 RASAL1O95294 804 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 PABPC4LP0CB38 370 aaKnown RBP13.58□□□□□ -0.24
LDB3-204ENST00000372066 RAP2AP10114 183 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 ADRB3P13945 408 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 IL1RNP18510 177 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 SDC1P18827 310 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 IL12RB1P42701 662 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 CTSCP53634 463 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 MTPNP58546 118 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 YBX1P67809 324 aaKnown RBP13.58□□□□□ -0.24
LDB3-204ENST00000372066 SRSF11Q05519 484 aaKnown RBP13.58□□□□□ -0.24
LDB3-204ENST00000372066 ABRQ12979 859 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 NRF1Q16656 503 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.58□□□□□ -0.24
LDB3-204ENST00000372066 ZNF548Q8NEK5 533 aaPredicted RBP13.58□□□□□ -0.24
LDB3-204ENST00000372066 WDR20Q8TBZ3 569 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 ARRDC3Q96B67 414 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 SIPA1Q96FS4 1042 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 ZNF583Q96ND8 569 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 MKRN2Q9H000 416 aaKnown RBP13.58□□□□□ -0.24
LDB3-204ENST00000372066 ATG10Q9H0Y0 220 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 UBAP1Q9NZ09 502 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 GPR34Q9UPC5 381 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 PCDHGA11Q9Y5H2 935 aa13.58□□□□□ -0.24
LDB3-204ENST00000372066 ELOVL7A1L3X0 281 aa13.57□□□□□ -0.24
LDB3-204ENST00000372066 GSTA4O15217 222 aa13.57□□□□□ -0.24
LDB3-204ENST00000372066 DEAF1O75398 565 aaPredicted RBP13.57□□□□□ -0.24
LDB3-204ENST00000372066 RECQL5O94762 991 aaPredicted RBP13.57□□□□□ -0.24
LDB3-204ENST00000372066 SOD1P00441 154 aa13.57□□□□□ -0.24
LDB3-204ENST00000372066 SMIM18P0DKX4 95 aa13.57□□□□□ -0.24
LDB3-204ENST00000372066 NCK1P16333 377 aa13.57□□□□□ -0.24
LDB3-204ENST00000372066 GPR1P46091 355 aa13.57□□□□□ -0.24
LDB3-204ENST00000372066 ASMTP46597 345 aa13.57□□□□□ -0.24
LDB3-204ENST00000372066 TRPC1P48995 793 aa13.57□□□□□ -0.24
LDB3-204ENST00000372066 MYBPC1Q00872 1141 aa13.57□□□□□ -0.24
LDB3-204ENST00000372066 CHRNB3Q05901 458 aa13.57□□□□□ -0.24
LDB3-204ENST00000372066 ZNF234Q14588 700 aa13.57□□□□□ -0.24
LDB3-204ENST00000372066 XKR6Q5GH73 641 aa13.57□□□□□ -0.24
LDB3-204ENST00000372066 NHSL2Q5HYW2 709 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms