RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 PDGFRLQ15198 375 aa10.81□□□□□ -0.68
COL11A1-203ENST00000370096 ASTE1Q2TB18 679 aaPredicted RBP10.81□□□□□ -0.68
COL11A1-203ENST00000370096 BANPQ8N9N5 519 aa10.81□□□□□ -0.68
COL11A1-203ENST00000370096 STK35Q8TDR2 534 aa10.81□□□□□ -0.68
COL11A1-203ENST00000370096 GEMIN6Q8WXD5 167 aaKnown RBP10.81□□□□□ -0.68
COL11A1-203ENST00000370096 NINJ1Q92982 152 aa10.81□□□□□ -0.68
COL11A1-203ENST00000370096 LDAHQ9H6V9 325 aa10.81□□□□□ -0.68
COL11A1-203ENST00000370096 FLRT1Q9NZU1 646 aa10.81□□□□□ -0.68
COL11A1-203ENST00000370096 ZDHHC2Q9UIJ5 367 aa10.81□□□□□ -0.68
COL11A1-203ENST00000370096 UFM1P61960 85 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 COL28A1Q2UY09 1125 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 SH3PXD2AQ5TCZ1 1133 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 FIP1L1Q6UN15 594 aaKnown RBP10.8□□□□□ -0.68
COL11A1-203ENST00000370096 ABHD13Q7L211 337 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 SLC30A8Q8IWU4 369 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 SMG8Q8ND04 991 aaKnown RBP10.8□□□□□ -0.68
COL11A1-203ENST00000370096 OR13C4Q8NGS5 318 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 TAS2R1Q9NYW7 299 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 GRHPRQ9UBQ7 328 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 UTS2RQ9UKP6 389 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 OR6C6A6NF89 314 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 CXCL11O14625 94 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 TGFB1I1O43294 461 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 MTX2O75431 263 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 CTHP32929 405 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 CCR8P51685 355 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 CFAP77Q6ZQR2 320 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 KIF18BQ86Y91 864 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 C9orf43Q8TAL5 461 aaPredicted RBP10.8□□□□□ -0.68
COL11A1-203ENST00000370096 NPLOC4Q8TAT6 608 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 KAZALD1Q96I82 304 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 TP63Q9H3D4 680 aaPredicted RBP10.8□□□□□ -0.68
COL11A1-203ENST00000370096 MGAT4CQ9UBM8 478 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 FZD10Q9ULW2 581 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 PCDHGA11Q9Y5H2 935 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 B4DGG1 531 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 CNOT4O95628 575 aaKnown RBP10.8□□□□□ -0.68
COL11A1-203ENST00000370096 SLC16A8O95907 504 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 LSSP48449 732 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 CRTC1Q6UUV9 634 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 PYURFQ96I23 114 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 ALPK1Q96QP1 1244 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 TLE6Q9H808 572 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 USP29Q9HBJ7 922 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 TBCCD1Q9NVR7 557 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 KLRF1Q9NZS2 232 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 REV1Q9UBZ9 1251 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 K7EPI3 171 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 NIPSNAP2O75323 286 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 HTR2BP41595 481 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 OR1E2P47887 323 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 SNRPD2P62316 118 aaKnown RBP10.8□□□□□ -0.68
COL11A1-203ENST00000370096 HERVK_113P63132 956 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 SP2Q02086 613 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 ZNF616Q08AN1 781 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 TAF1AQ15573 450 aaPredicted RBP10.8□□□□□ -0.68
COL11A1-203ENST00000370096 CHRFAM7AQ494W8 412 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 POC1BQ8TC44 478 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 ERVK-6Q9BXR3 956 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 FTHL17Q9BXU8 183 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 SLC25A51Q9H1U9 297 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 MEAF6Q9HAF1 191 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 NUFIP1Q9UHK0 495 aaKnown RBP10.8□□□□□ -0.68
COL11A1-203ENST00000370096 MYH10P35580 1976 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 MYO10Q9HD67 2058 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 ARPC4-TTLL3A0A0A6YYG9 625 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 HMGN1P05114 100 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 SPATA31C1P0DKV0 1188 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 SLURP2P0DP57 97 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 RHOQP17081 205 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 SFT2D3Q587I9 215 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 OR2T5Q6IEZ7 315 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 CERS6Q6ZMG9 384 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 PIM3Q86V86 326 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 OR2T29Q8NH02 315 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 CLEC4CQ8WTT0 213 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 OR52B2Q96RD2 323 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 EXTL2Q9UBQ6 330 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 PCDHAC2Q9Y5I4 1007 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 LCKP06239 509 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 EDNRBP24530 442 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 LEPRP48357 1165 aaKnown RBP10.8□□□□□ -0.68
COL11A1-203ENST00000370096 ZNF404Q494X3 552 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 CEACAM20Q6UY09 585 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 MOB2Q70IA6 237 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 SAMD12Q8N8I0 201 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 ARL14EPQ8N8R7 260 aaPredicted RBP10.8□□□□□ -0.68
COL11A1-203ENST00000370096 TMEM209Q96SK2 561 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 PHOX2BQ99453 314 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 CNTN3Q9P232 1028 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 SCP2D1Q9UJQ7 156 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 PCDHA2Q9Y5H9 948 aa10.8□□□□□ -0.68
COL11A1-203ENST00000370096 ADAMTS3O15072 1205 aa10.79□□□□□ -0.68
COL11A1-203ENST00000370096 ZNF254O75437 659 aa10.79□□□□□ -0.68
COL11A1-203ENST00000370096 MMP8P22894 467 aa10.79□□□□□ -0.68
COL11A1-203ENST00000370096 PTGIRP43119 386 aa10.79□□□□□ -0.68
COL11A1-203ENST00000370096 BDKRB1P46663 353 aa10.79□□□□□ -0.68
COL11A1-203ENST00000370096 CLRN1P58418 232 aa10.79□□□□□ -0.68
COL11A1-203ENST00000370096 ERVK-8P63133 956 aa10.79□□□□□ -0.68
COL11A1-203ENST00000370096 MFSD13AQ14CX5 517 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms