RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 TRIM15Q9C019 465 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 ZDHHC5Q9C0B5 715 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 FSCN3Q9NQT6 498 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 NEUROG3Q9Y4Z2 214 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 SNX11Q9Y5W9 270 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 C15orf38-AP3S2A0A0A6YYH1 394 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 A6NHS1 94 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 OR52A4PA6NMU1 304 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 PDZK1P1A8MUH7 402 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 KCNJ13O60928 360 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 SLC35G4P0C7Q5 338 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 UBTFL6P0CB48 400 aaPredicted RBP16.67■□□□□ 0.26
UBE3D-203ENST00000369747 CTSEP14091 401 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 IDSP22304 550 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 MAP4P27816 1152 aaKnown RBP16.67■□□□□ 0.26
UBE3D-203ENST00000369747 BLKP51451 505 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 ILF3Q12906 894 aaKnown RBP eCLIP16.67■□□□□ 0.261e-6■■■■□ 22.3
UBE3D-203ENST00000369747 CLCA4Q14CN2 919 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 ARPINQ7Z6K5 226 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 PHC3Q8NDX5 983 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 KCTD14Q9BQ13 255 aaPredicted RBP16.67■□□□□ 0.26
UBE3D-203ENST00000369747 ELOVL6Q9H5J4 265 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 ARMC1Q9NVT9 282 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 SCHIP1Q9P0W5 487 aaPredicted RBP16.67■□□□□ 0.26
UBE3D-203ENST00000369747 TMEM131Q92545 1883 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 CABIN1Q9Y6J0 2220 aa16.67■□□□□ 0.26
UBE3D-203ENST00000369747 PATE3B3GLJ2 98 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 BCKDHAP12694 445 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 PRPH2P23942 346 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 BDKRB1P46663 353 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 FOLH1Q04609 750 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 CHIT1Q13231 466 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 MED21Q13503 144 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 PWP1Q13610 501 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 TEAD4Q15561 434 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 CAPRIN2Q6IMN6 1127 aaKnown RBP16.66■□□□□ 0.26
UBE3D-203ENST00000369747 HMBOX1Q6NT76 420 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 DUS1LQ6P1R4 473 aaKnown RBP16.66■□□□□ 0.26
UBE3D-203ENST00000369747 IFNEQ86WN2 208 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 KRTCAP2Q8N6L1 136 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 GLB1L3Q8NCI6 653 aaPredicted RBP16.66■□□□□ 0.26
UBE3D-203ENST00000369747 TFGQ92734 400 aaPredicted RBP16.66■□□□□ 0.26
UBE3D-203ENST00000369747 INSM2Q96T92 566 aaPredicted RBP16.66■□□□□ 0.26
UBE3D-203ENST00000369747 ZBTB18Q99592 522 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 CGREF1Q99674 301 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 LRFN3Q9BTN0 628 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 DPY30Q9C005 99 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 SEMA6AQ9H2E6 1030 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 MUC13Q9H3R2 512 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 CLMPQ9H6B4 373 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 CCM2LQ9NUG4 571 aaPredicted RBP16.66■□□□□ 0.26
UBE3D-203ENST00000369747 STOX2Q9P2F5 926 aaPredicted RBP16.66■□□□□ 0.26
UBE3D-203ENST00000369747 USP22Q9UPT9 525 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 ASF1AQ9Y294 204 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 DLGAP4Q9Y2H0 992 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 SERTM1A2A2V5 107 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 SDC3O75056 442 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 CATP04040 527 aaKnown RBP16.66■□□□□ 0.26
UBE3D-203ENST00000369747 LYNP07948 512 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 HALP42357 657 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 CTSKP43235 329 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 SELPLGQ14242 412 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 FXNQ16595 210 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 UAP1L1Q3KQV9 507 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 FAM174BQ3ZCQ3 159 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 PEAR1Q5VY43 1037 aaPredicted RBP16.66■□□□□ 0.26
UBE3D-203ENST00000369747 AGTRAPQ6RW13 159 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 THOC6Q86W42 341 aaKnown RBP16.66■□□□□ 0.26
UBE3D-203ENST00000369747 SFTPA2Q8IWL1 248 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 GOLM1Q8NBJ4 401 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 OR5AR1Q8NGP9 310 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 SLC13A3Q8WWT9 602 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 CCDC138Q96M89 665 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 PPM1MQ96MI6 270 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 FOPNLQ96NB1 174 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 EFHD1Q9BUP0 239 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 SUSD2Q9UGT4 822 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 SNX13Q9Y5W8 968 aa16.66■□□□□ 0.26
UBE3D-203ENST00000369747 DHRS12A0PJE2 317 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 NPIPB8E9PQR5 432 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 TIPRLO75663 272 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 CFIP05156 583 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 MTHFD1P11586 935 aaKnown RBP16.65■□□□□ 0.26
UBE3D-203ENST00000369747 JUPP14923 745 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 CD22P20273 847 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 SPANXN4Q5MJ08 99 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 FRG2Q64ET8 278 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 TAF8Q7Z7C8 310 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 KLHDC8AQ8IYD2 350 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 CLHC1Q8NHS4 586 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 ATL1Q8WXF7 558 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 GTF2H4Q92759 462 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 MAGEB10Q96LZ2 347 aaPredicted RBP16.65■□□□□ 0.26
UBE3D-203ENST00000369747 C12orf66Q96MD2 445 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 FRG2BQ96QU4 278 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 PKP4Q99569 1192 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 IMP3Q9NV31 184 aaKnown RBP16.65■□□□□ 0.26
UBE3D-203ENST00000369747 TAAR2Q9P1P5 351 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 SCOCQ9UIL1 159 aa16.65■□□□□ 0.26
UBE3D-203ENST00000369747 CNOT11Q9UKZ1 510 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms