RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 RHBDF1Q96CC6 855 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 TSPAN17Q96FV3 270 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 FER1L6-AS2Q96M78 137 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 FUT8Q9BYC5 575 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 SOX17Q9H6I2 414 aaPredicted RBP19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 SEMA3GQ9NS98 782 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 CTNNAL1Q9UBT7 734 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 ZNF282Q9UDV7 671 aaPredicted RBP19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 HMX2A2RU54 273 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 PHGDHO43175 533 aaKnown RBP19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 ATXN8OSP0DMR3 200 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 CD1DP15813 335 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 FBLP22087 321 aaKnown RBP19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 SPRP35270 261 aaPredicted RBP19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 HNMTP50135 292 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 KLC1Q07866 573 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 VWA2Q5GFL6 755 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 CDKL4Q5MAI5 379 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 UBAP2Q5T6F2 1119 aaKnown RBP19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 ATG9BQ674R7 924 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 SHISA6Q6ZSJ9 500 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 LAPTM4BQ86VI4 370 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 MESP1Q9BRJ9 268 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 DRC3Q9H069 523 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 EPN3Q9H201 632 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 SPNS1Q9H2V7 528 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 MAP4K5Q9Y4K4 846 aa19.5■□□□□ 0.71
SMNDC1-201ENST00000369592 A0A0A6YYC8 382 aaPredicted RBP19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 TRBC2A0A5B9 178 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 I3L1I5 382 aaPredicted RBP19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 MASP2O00187 686 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 PEX12O00623 359 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 NSA2O95478 260 aaKnown RBP19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 ANXA5P08758 320 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 CCDC166P0CW27 439 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 STMN1P16949 149 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 GGT5P36269 586 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 CCR8P51685 355 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 PGDP52209 483 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 EFNA3P52797 238 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 RAB10P61026 200 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 EFTUD2Q15029 972 aaKnown RBP eCLIP19.49■□□□□ 0.715e-8■■■■■ 46.5
SMNDC1-201ENST00000369592 TGFBIQ15582 683 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 GLE1Q53GS7 698 aaKnown RBP19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 CATSPEREQ5SY80 951 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 PRSS41Q7RTY9 318 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 THOC6Q86W42 341 aaKnown RBP19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 CTAGE3PQ8IX95 158 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 SHISA5Q8N114 240 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 SPATA6LQ8N4H0 392 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 AFAP1L2Q8N4X5 818 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 PPM1NQ8N819 430 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 ZNF740Q8NDX6 193 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 MNS1Q8NEH6 495 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 SLC5A11Q8WWX8 675 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 ZNF592Q92610 1267 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 ALKBH8Q96BT7 664 aaKnown RBP19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 MACROD1Q9BQ69 325 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 TXNDC16Q9P2K2 825 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 SLC22A14Q9Y267 594 aa19.49■□□□□ 0.71
SMNDC1-201ENST00000369592 H0YIG0 161 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 TAPBPO15533 448 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 PRPF4O43172 522 aaKnown RBP eCLIP19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 STATHP02808 62 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 SLC35E2BP0CK96 405 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 SCTRP47872 440 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 KCNC1P48547 511 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 SLC12A2P55011 1212 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 ATP6V0D1P61421 351 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 OCA2Q04671 838 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 DLG1Q12959 904 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 OR4D1Q15615 310 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 NDUFA9Q16795 377 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 ASPGQ86U10 573 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 ZC3H7AQ8IWR0 971 aaKnown RBP19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 GALNT16Q8N428 558 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 KCT2Q8NC54 265 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 CAMKVQ8NCB2 501 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 OR11G2Q8NGC1 345 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 MIEF2Q96C03 454 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 MMABQ96EY8 250 aaPredicted RBP19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 ZNF552Q9H707 407 aaPredicted RBP19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 PELI2Q9HAT8 420 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 MKKSQ9NPJ1 570 aaPredicted RBP19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 NINJ2Q9NZG7 142 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 FBXL4Q9UKA2 621 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 ZNF451Q9Y4E5 1061 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 SLC22A7Q9Y694 548 aa19.48■□□□□ 0.71
SMNDC1-201ENST00000369592 FLNCQ14315 2725 aa19.47■□□□□ 0.71
SMNDC1-201ENST00000369592 CTAGE15A4D2H0 777 aa19.47■□□□□ 0.71
SMNDC1-201ENST00000369592 PABPN1LA6NDY0 278 aaKnown RBP19.47■□□□□ 0.71
SMNDC1-201ENST00000369592 CTAGE8P0CG41 777 aa19.47■□□□□ 0.71
SMNDC1-201ENST00000369592 GMPRP36959 345 aa19.47■□□□□ 0.71
SMNDC1-201ENST00000369592 REEP5Q00765 189 aa19.47■□□□□ 0.71
SMNDC1-201ENST00000369592 MEF2AQ02078 507 aaPredicted RBP19.47■□□□□ 0.71
SMNDC1-201ENST00000369592 TLE1Q04724 770 aa19.47■□□□□ 0.71
SMNDC1-201ENST00000369592 PWP1Q13610 501 aa19.47■□□□□ 0.71
SMNDC1-201ENST00000369592 MYBPC3Q14896 1274 aa19.47■□□□□ 0.71
SMNDC1-201ENST00000369592 C18orf21Q32NC0 220 aaPredicted RBP19.47■□□□□ 0.71
SMNDC1-201ENST00000369592 COLEC12Q5KU26 742 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms