RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ST8SIA5O15466 376 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 GATCO43716 136 aaKnown RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 NDUFS2O75306 463 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 SEMA3DO95025 777 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 ITGAVP06756 1048 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 PNLIPP16233 465 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 XRCC1P18887 633 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 SAT1P21673 171 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 TIE1P35590 1138 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 POLR2IP36954 125 aaKnown RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 TSPAN7P41732 249 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 ELK3P41970 407 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 GRIA1P42261 906 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 IDH3AP50213 366 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 EPHB1P54762 984 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 MRPS22P82650 360 aaKnown RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 MS4A2Q01362 244 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CFHR1Q03591 330 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CEACAM7Q14002 265 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 UBXN2BQ14CS0 331 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 ATP6AP1Q15904 470 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 ZFP69Q49AA0 526 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 RSBN1Q5VWQ0 802 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 PRSS42Q7Z5A4 293 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CAMK1DQ8IU85 385 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CADM2Q8N3J6 435 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 DCBLD1Q8N8Z6 715 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 FLCNQ8NFG4 579 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 OR4M1Q8NGD0 313 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 OR2T34Q8NGX1 318 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 PIWIL2Q8TC59 973 aaKnown RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 SERAC1Q96JX3 654 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 SIGLEC10Q96LC7 697 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 FERD3LQ96RJ6 166 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 TMEM216Q9P0N5 145 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 PAK5Q9P286 719 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 ANAPC2Q9UJX6 822 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 NEUROG3Q9Y4Z2 214 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 TCRBV7S3A2A0A539 114 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 TRIM3O75382 744 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 MT-ND3P03897 115 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 C1SP09871 688 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CEACAM1P13688 526 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 HOXB2P14652 356 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 ME2P23368 584 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 ARNTP27540 789 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 HTR2BP41595 481 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 SLC11A2P49281 568 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 KIAA1024LP59773 190 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CNTN1Q12860 1018 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 MERTKQ12866 999 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 GRIK2Q13002 908 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 RSPO4Q2I0M5 234 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 RBM48Q5RL73 367 aaKnown RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 C6orf132Q5T0Z8 1188 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 KIAA1614Q5VZ46 1190 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 C8orf82Q6P1X6 216 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 DPY19L3Q6ZPD9 716 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 NOXA1Q86UR1 476 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 NAT16Q8N8M0 369 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CEP76Q8TAP6 659 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 SETD6Q8TBK2 473 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 SLC22A8Q8TCC7 542 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 SETD7Q8WTS6 366 aaKnown RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 APOL2Q9BQE5 337 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 EBF4Q9BQW3 602 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CHID1Q9BWS9 393 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 C20orf27Q9GZN8 174 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 EFCAB1Q9HAE3 211 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 ZDHHC4Q9NPG8 344 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 GIMAP4Q9NUV9 329 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 SYBUQ9NX95 663 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 FBXL12Q9NXK8 326 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 UBP1Q9NZI7 540 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 SNRNP200O75643 2136 aaKnown RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CDRT15L2A8MXV6 281 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 MFSD11O43934 449 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 USP12O75317 370 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 PIGNO95427 931 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 IFNA14P01570 189 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 SLC4A1P02730 911 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 ARHGDIBP52566 201 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 RAD23AP54725 363 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CRADDP78560 199 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 MRPS15P82914 257 aaKnown RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CLCQ05315 142 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 RTP5Q14D33 572 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 PNCKQ6P2M8 343 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 GPRIN3Q6ZVF9 776 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 HORMAD1Q86X24 394 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 STK40Q8N2I9 435 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CHCHD4Q8N4Q1 142 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 OR52H1Q8NGJ2 320 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 RP9Q8TA86 221 aaKnown RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CPT1BQ92523 772 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 UFD1Q92890 307 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 ATXN7L3BQ96GX2 97 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 QKIQ96PU8 341 aaKnown RBP eCLIP6.64□□□□□ -1.352e-14■■■□□ 16.7
CSDE1-204ENST00000369530 ADI1Q9BV57 179 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms