RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 HM13Q8TCT9 377 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 TMEM125Q96AQ2 219 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 HIST1H2AHQ96KK5 128 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 HIST1H2AJQ99878 128 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 H2AFJQ9BTM1 129 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 PRDM6Q9NQX0 595 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 AIG1Q9NVV5 245 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 SCHIP1Q9P0W5 487 aaPredicted RBP10.3□□□□□ -0.76
TPM3-212ENST00000368533 ZFR2Q9UPR6 939 aaKnown RBP10.3□□□□□ -0.76
TPM3-212ENST00000368533 IGLV3-16A0A075B6K0 115 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 ARHGEF33A8MVX0 844 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 GSTA4O15217 222 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 MAN1A2O60476 641 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 ATG13O75143 517 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 POP7O75817 140 aaKnown RBP10.3□□□□□ -0.76
TPM3-212ENST00000368533 LDLRP01130 860 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 HSD17B1P14061 328 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 NTSR1P30989 418 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 RPS14P62263 151 aaKnown RBP10.3□□□□□ -0.76
TPM3-212ENST00000368533 ERVK-8P63133 956 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 AASDHQ4L235 1098 aaPredicted RBP10.3□□□□□ -0.76
TPM3-212ENST00000368533 MTSS1LQ765P7 747 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 ADGRG5Q8IZF4 528 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 SLC38A6Q8IZM9 456 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 DHRSXQ8N5I4 330 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 TFAP2CQ92754 450 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 THUMPD3Q9BV44 507 aaKnown RBP10.3□□□□□ -0.76
TPM3-212ENST00000368533 TRIM54Q9BYV2 358 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 FANCEQ9HB96 536 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 PARVBQ9HBI1 364 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 NUDT4Q9NZJ9 180 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 OARD1Q9Y530 152 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 TRBV23OR9-2A0A075B6M9 112 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 PRAMEF33A0A0G2JMD5 474 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 H0YJX3 145 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 MATN4O95460 622 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 DNTTP04053 509 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 G6PDP11413 515 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 DCKP27707 260 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 ALDH4A1P30038 563 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 ACSL1P33121 698 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 RAB15P59190 212 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 MEF2AQ02078 507 aaPredicted RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 PIGFQ07326 219 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 SDE2Q6IQ49 451 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 C8orf82Q6P1X6 216 aaPredicted RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 ABHD11Q8NFV4 315 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 ASZ1Q8WWH4 475 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 JPH3Q8WXH2 748 aaPredicted RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 NSMCE2Q96MF7 247 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 GAS2L1Q99501 681 aaPredicted RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 ANKRD60Q9BZ19 345 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 TRIT1Q9H3H1 467 aaKnown RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 ACTR8Q9H981 624 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 ITM2CQ9NQX7 267 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 AGPAT4Q9NRZ5 378 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 ABCD2Q9UBJ2 740 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 RABL2AQ9UBK7 228 aaPredicted RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 ZNF229Q9UJW7 825 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 KCNK6Q9Y257 313 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 INVSQ9Y283 1065 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 POLR3HQ9Y535 204 aaPredicted RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 A0A1W2PQF6 199 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 H3BM21 787 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 NOL3O60936 208 aaKnown RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 CLPXO76031 633 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 SLC16A8O95907 504 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 ANXA5P08758 320 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 ACP5P13686 325 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 TPD52P55327 224 aaPredicted RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 OR4D2P58180 307 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 LSM3P62310 102 aaKnown RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 NAE1Q13564 534 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 IRF4Q15306 451 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 AP5B1Q2VPB7 878 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 FAM46CQ5VWP2 391 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 GLYATQ6IB77 296 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 LCN8Q6JVE9 175 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 EPHX4Q8IUS5 362 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 CLEC4FQ8N1N0 589 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 LILRB4Q8NHJ6 448 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 ZFP90Q8TF47 636 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 RLN3Q8WXF3 142 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 FIG4Q92562 907 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 BIRC7Q96CA5 298 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 CHID1Q9BWS9 393 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 WARS2Q9UGM6 360 aaKnown RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 PTBP2Q9UKA9 531 aaKnown RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 PCDHA9Q9Y5H5 950 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 CFAP54Q96N23 3096 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 TDRD6O60522 2096 aaKnown RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 DLGAP1O14490 977 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 STK16O75716 305 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 IL12AP29459 219 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 RPL38P63173 70 aaKnown RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 RACK1P63244 317 aaKnown RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 RCAN2Q14206 197 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 SPCS2Q15005 226 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms