RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 HMGCLL1Q8TB92 370 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 ELP5Q8TE02 316 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 SH3GL2Q99962 352 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 ATG10Q9H0Y0 220 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 NLE1Q9NVX2 485 aaPredicted RBP13.72□□□□□ -0.21
VAMP4-202ENST00000367740 CTTNBP2NLQ9P2B4 639 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 SCN3AQ9NY46 2000 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 A0A087X0T9 212 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 SYT5O00445 386 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 ANXA9O76027 345 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 KRT1P04264 644 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 FAM228BP0C875 321 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 XCR1P46094 333 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 HSPA14Q0VDF9 509 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 PTK6Q13882 451 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 FAM53BQ14153 422 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 BZW1Q7L1Q6 419 aaKnown RBP13.71□□□□□ -0.21
VAMP4-202ENST00000367740 PRSS41Q7RTY9 318 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 RELL2Q8NC24 303 aaPredicted RBP13.71□□□□□ -0.21
VAMP4-202ENST00000367740 OR9A4Q8NGU2 314 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 LKAAEAR1Q8TD35 194 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 SPATA13Q96N96 652 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 QKIQ96PU8 341 aaKnown RBP eCLIP13.71□□□□□ -0.21
VAMP4-202ENST00000367740 OR2A5Q96R48 311 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 LPAR4Q99677 370 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 NUP62CLQ9H1M0 184 aa13.71□□□□□ -0.21
VAMP4-202ENST00000367740 IGKV1-8A0A0C4DH67 115 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 A0A1W2PPR1 153 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 TRIM64A6NGJ6 449 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 TRIM64BA6NI03 449 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 PHF2O75151 1096 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 GPC4O75487 556 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 BDKRB1P46663 353 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 AVPR1BP47901 424 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 MLF1P58340 268 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 MYL5Q02045 173 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 NAA25Q14CX7 972 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 P3H2Q8IVL5 708 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 CDKN2AIPNLQ96HQ2 116 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 SMC6Q96SB8 1091 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 BDH2Q9BUT1 245 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 ACAT2Q9BWD1 397 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 HCN3Q9P1Z3 774 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 UVRAGQ9P2Y5 699 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 B4GALT7Q9UBV7 327 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 TRHDEQ9UKU6 1024 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 LIPGQ9Y5X9 500 aa13.7□□□□□ -0.22
VAMP4-202ENST00000367740 OR14I1A6ND48 311 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 OR51F1A6NGY5 319 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 H0YIG0 161 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 BCKDKO14874 412 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 WIPF1O43516 503 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 OR1I1O60431 355 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 F12P00748 615 aaPredicted RBP13.69□□□□□ -0.22
VAMP4-202ENST00000367740 CMPK1P30085 196 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 RHAGQ02094 409 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 ABRAXAS2Q15018 415 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 PAOXQ6QHF9 649 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 MFSD7Q6UXD7 560 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 MDGA2Q7Z553 956 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 LRRC75A-AS1Q8N1F1 130 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 OR51Q1Q8NH59 317 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 CREB3L4Q8TEY5 395 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 ZNF592Q92610 1267 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 TSLPQ969D9 159 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 RAD51AP1Q96B01 352 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 ZDHHC11Q9H8X9 412 aa13.69□□□□□ -0.22
VAMP4-202ENST00000367740 CLCA1A8K7I4 914 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 FAM166BA8MTA8 275 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 CST8O60676 142 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 NSA2O95478 260 aaKnown RBP13.68□□□□□ -0.22
VAMP4-202ENST00000367740 C1orf105O95561 183 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 EPXP11678 715 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 PSMB4P28070 264 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 FOXN2P32314 431 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 ASCL1P50553 236 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 ACTN3Q08043 901 aaPredicted RBP13.68□□□□□ -0.22
VAMP4-202ENST00000367740 CBLBQ13191 982 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 C1orf185Q5T7R7 199 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 RIPPLY2Q5TAB7 128 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 KAZNQ674X7 775 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 ALKBH5Q6P6C2 394 aaKnown RBP13.68□□□□□ -0.22
VAMP4-202ENST00000367740 CAPN12Q6ZSI9 719 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 PCGF5Q86SE9 256 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 CYP4Z2PQ8N1L4 340 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 ASZ1Q8WWH4 475 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 RNASE6Q93091 150 aaKnown RBP13.68□□□□□ -0.22
VAMP4-202ENST00000367740 RERGQ96A58 199 aaPredicted RBP13.68□□□□□ -0.22
VAMP4-202ENST00000367740 HAUS1Q96CS2 278 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 DEPPQ9NTK1 212 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 LCMT1Q9UIC8 334 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 NENFQ9UMX5 172 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 RUVBL2Q9Y230 463 aaKnown RBP13.68□□□□□ -0.22
VAMP4-202ENST00000367740 NFS1Q9Y697 457 aa13.68□□□□□ -0.22
VAMP4-202ENST00000367740 EML6Q6ZMW3 1958 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 PINLYPA6NC86 204 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 TXNDC9O14530 226 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 STATHP02808 62 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 EZRP15311 586 aaKnown RBP13.67□□□□□ -0.22
VAMP4-202ENST00000367740 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms