RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 HAND2P61296 217 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 EEF1A1P68104 462 aaKnown RBP5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 HYAL1Q12794 435 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 ZBTB17Q13105 803 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 GPM6BQ13491 265 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 NDUFAF5Q5TEU4 345 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 EEF1A1P5Q5VTE0 462 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 FAM171BQ6P995 826 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 PLXDC2Q6UX71 529 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 MFSD6Q6ZSS7 791 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 MYOCDQ8IZQ8 938 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 PPTC7Q8NI37 304 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 RTP4Q96DX8 246 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 VMP1Q96GC9 406 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 RMDN2Q96LZ7 410 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 EGFL8Q99944 293 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 SLX1AQ9BQ83 275 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 FERMT1Q9BQL6 677 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 TMEM204Q9BSN7 226 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 DESI2Q9BSY9 194 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 FSD1Q9BTV5 496 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 FZD8Q9H461 694 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 LRRC4Q9HBW1 653 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 PXMP2Q9NR77 195 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 MUTYHQ9UIF7 546 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 RNF150Q9ULK6 438 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 NEDD4P46934 1319 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 TTC41PQ6P2S7 1318 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 BAZ2AQ9UIF9 1905 aaKnown RBP5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 HYKKA2RU49 373 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 MAGEA13PA6NCF6 341 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 LRRC37A2A6NM11 1700 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 OR6C76A6NM76 312 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 CLDN4O14493 209 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 MBTPS2O43462 519 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 SYNCRIPO60506 623 aaKnown RBP5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 SLU7O95391 586 aaKnown RBP5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 CHRNA1P02708 482 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 ALPLP05186 524 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 TFAP2AP05549 437 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 LIPFP07098 398 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 NGFRP08138 427 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 SMIM10L2AP0DMW4 78 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 SMIM10L2BP0DMW5 78 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 HSPD1P10809 573 aaKnown RBP5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 DAOP14920 347 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 PDGFRAP16234 1089 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 MPZP25189 248 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 AHRP35869 848 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 BMXP51813 675 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 KIF5AQ12840 1032 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 STXBP2Q15833 593 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 CDC37Q16543 378 aaPredicted RBP5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 QRICH1Q2TAL8 776 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 HERC4Q5GLZ8 1057 aaPredicted RBP5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 CELF3Q5SZQ8 465 aaKnown RBP5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 PRR27Q6MZM9 219 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 STOX1Q6ZVD7 989 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 RPAINQ86UA6 219 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 RDM1Q8NG50 284 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 LINGO1Q96FE5 620 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 OTUB1Q96FW1 271 aaPredicted RBP5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 FNBP1Q96RU3 617 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 IWS1Q96ST2 819 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 CPNE1Q99829 537 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 BTBD10Q9BSF8 475 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 DNAJB9Q9UBS3 223 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 CPSF3Q9UKF6 684 aaKnown RBP5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 ZFP37Q9Y6Q3 630 aaPredicted RBP5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 C5orf42Q9H799 3197 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 SCN10AQ9Y5Y9 1956 aa5.27□□□□□ -1.57
RNU4-39P-201ENST00000362455 CKAP5Q14008 2032 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 RAD50Q92878 1312 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 MYO15AQ9UKN7 3530 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 MCM3APO60318 1980 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 A0A0G2JNG1 304 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 MED19A0JLT2 244 aaPredicted RBP5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 C5orf67F2Z3F1 127 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 ZBTB11O95625 1053 aaPredicted RBP5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 H1F0P07305 194 aaKnown RBP5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 ACP2P11117 423 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 MX1P20591 662 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 TCEA1P23193 301 aaKnown RBP5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 ASCL1P50553 236 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 MLLT10P55197 1068 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 DSCR9P59020 149 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 POLR2LP62875 67 aaKnown RBP5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 SCN1BQ07699 218 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 KIR2DS5Q14953 304 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 SLC39A14Q15043 492 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 ASIC2Q16515 512 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 C6orf136Q5SQH8 315 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 STXBP5Q5T5C0 1151 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 ARHGEF16Q5VV41 709 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 IRAK1BP1Q5VVH5 260 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 PACS1Q6VY07 963 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 SPATA19Q7Z5L4 167 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 ADGRD2Q7Z7M1 963 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 TMPRSS11BQ86T26 416 aa5.26□□□□□ -1.57
RNU4-39P-201ENST00000362455 SPATA2LQ8IUW3 424 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms