RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 RFPL4BQ6ZWI9 263 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 NRARPQ7Z6K4 114 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 ZSWIM9Q86XI8 627 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 ZNF683Q8IZ20 524 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 CACTIN-AS1Q8N1I8 211 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 BEND7Q8N7W2 519 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-201ENST00000361909 OR4F6Q8NGB9 312 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 OR13C4Q8NGS5 318 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 HMCESQ96FZ2 354 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 DHRS9Q9BPW9 319 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 TRAF4Q9BUZ4 470 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-201ENST00000361909 POLR1EQ9GZS1 481 aaKnown RBP18.44■□□□□ 0.54
CMTM3-201ENST00000361909 IRF2BPLQ9H1B7 796 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 RASSF1Q9NS23 344 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 ACOXLQ9NUZ1 547 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 TMEM248Q9NWD8 314 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 AASSQ9UDR5 926 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 ABCG2Q9UNQ0 655 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 SAMHD1Q9Y3Z3 626 aaKnown RBP18.44■□□□□ 0.54
CMTM3-201ENST00000361909 BPTFQ12830 3046 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 ICMTO60725 284 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 ARHGEF15O94989 841 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 CXCL14O95715 111 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 C9P02748 559 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 PKMP14618 531 aaKnown RBP18.44■□□□□ 0.54
CMTM3-201ENST00000361909 ARL1P40616 181 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-201ENST00000361909 MLLT3P42568 568 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-201ENST00000361909 IL10RBQ08334 325 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 ABRAXAS2Q15018 415 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 AAK1Q2M2I8 961 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 PARP15Q460N3 678 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 ERICH5Q6P6B1 374 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 GOLGA7Q7Z5G4 137 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 DNAJB7Q7Z6W7 309 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-201ENST00000361909 ADAMTSL2Q86TH1 951 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 SERPINA11Q86U17 422 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 IQCF2Q8IXL9 164 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 LINGO1Q96FE5 620 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 EPYCQ99645 322 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 BARD1Q99728 777 aaKnown RBP18.44■□□□□ 0.54
CMTM3-201ENST00000361909 PCDHGA6Q9Y5G7 932 aa18.44■□□□□ 0.54
CMTM3-201ENST00000361909 PLXNA4Q9HCM2 1894 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 LOC100506127A0A0U1RQW1 187 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 ADH1AP07327 375 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 HOXB9P17482 250 aaPredicted RBP18.43■□□□□ 0.54
CMTM3-201ENST00000361909 GGT2P36268 569 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 ZNF140P52738 457 aaPredicted RBP18.43■□□□□ 0.54
CMTM3-201ENST00000361909 CSTF3Q12996 717 aaKnown RBP18.43■□□□□ 0.54
CMTM3-201ENST00000361909 GTF2H2Q13888 395 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 PTGR1Q14914 329 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 NXNL2Q5VZ03 156 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 GTF2H2CQ6P1K8 395 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 LILRA6Q6PI73 481 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 C19orf48Q6RUI8 117 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 ZNF438Q7Z4V0 828 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 CCDC28AQ8IWP9 274 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 RAVER1Q8IY67 606 aaKnown RBP18.43■□□□□ 0.54
CMTM3-201ENST00000361909 SLC7A6Q92536 515 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 CDK15Q96Q40 435 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 RETREG1Q9H6L5 497 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 MPP6Q9NZW5 540 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 DOCK4Q8N1I0 1966 aa18.43■□□□□ 0.54
CMTM3-201ENST00000361909 MEIOCA2RUB1 952 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 KRT87PA6NCN2 255 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 J3KR12 359 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 ARHGAP33O14559 1287 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 OR7A17O14581 309 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 TRIM3O75382 744 aaPredicted RBP18.42■□□□□ 0.54
CMTM3-201ENST00000361909 ADORA3P0DMS8 318 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 GNPDA1P46926 289 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 CLCN4P51793 760 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 IHHQ14623 411 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 C14orf80Q86SX3 495 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 RNF130Q86XS8 419 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 PHACTR4Q8IZ21 702 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 KCNJ9Q92806 393 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 KLHL5Q96PQ7 755 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 ZYG11BQ9C0D3 744 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 AGO1Q9UL18 857 aaKnown RBP18.42■□□□□ 0.54
CMTM3-201ENST00000361909 LOC105371267A0A1B0GV96 52 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 DRGXA6NNA5 263 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 TGM5O43548 720 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 ZNF682O95780 498 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 SYN1P17600 705 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 ERP29P30040 261 aaKnown RBP18.42■□□□□ 0.54
CMTM3-201ENST00000361909 TTPAP49638 278 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 UBE3AQ05086 875 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 IRF3Q14653 427 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 PTPRNQ16849 979 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 GPAT3Q53EU6 434 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 CCDC149Q6ZUS6 474 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 TRIM46Q7Z4K8 759 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 OR8H2Q8N162 312 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 DEPDC4Q8N2C3 294 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 LIX1Q8N485 282 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 ANKK1Q8NFD2 765 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 PLD4Q96BZ4 506 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 CLIP3Q96DZ5 547 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 ZFYVE19Q96K21 471 aa18.42■□□□□ 0.54
CMTM3-201ENST00000361909 WDFY2Q96P53 400 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms