RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 OR4F21O95013 312 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 ACADLP28330 430 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 RANBP1P43487 201 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 EMX2Q04743 252 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 DMWDQ09019 674 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 PRKG2Q13237 762 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 ATP6AP1LQ52LC2 224 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 RABL3Q5HYI8 236 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 DHRS4L2Q6PKH6 230 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 AGTRAPQ6RW13 159 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 HID1Q8IV36 788 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 CDYL2Q8N8U2 506 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 METTL6Q8TCB7 284 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 TFGQ92734 400 aaPredicted RBP12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 VPS33AQ96AX1 596 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 SCARF2Q96GP6 870 aaPredicted RBP12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 PKP4Q99569 1192 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 ATG10Q9H0Y0 220 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 CARS2Q9HA77 564 aaKnown RBP12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 DNAJC11Q9NVH1 559 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 MAGEL2Q9UJ55 1249 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 OR7A17O14581 309 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 EI24O14681 340 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 PFDN1O60925 122 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 GMNNO75496 209 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 SEC24DO94855 1032 aaPredicted RBP12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 IDSP22304 550 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 HMOX2P30519 316 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 CASP2P42575 452 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 RABIFP47224 123 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 SLC6A12P48065 614 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 ERVPABLB-1P60509 514 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 UFM1P61960 85 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 PAGE3Q5JUK9 113 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 NANOGP8Q6NSW7 305 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 SLC22A18ASQ8N1D0 253 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 DCBLD1Q8N8Z6 715 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 FNDC5Q8NAU1 212 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 OR4F6Q8NGB9 312 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 OR9A1PQ8NGU1 263 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 ZNF420Q8TAQ5 688 aaPredicted RBP12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 FAM110BQ8TC76 370 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 OR1E3Q8WZA6 343 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 SNX19Q92543 992 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 RAD51AP1Q96B01 352 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 OR2M4Q96R27 311 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 NTMT1Q9BV86 223 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 ZDHHC5Q9C0B5 715 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 NANOGQ9H9S0 305 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 GALNT8Q9NY28 637 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 STOX2Q9P2F5 926 aaPredicted RBP12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 FAF1Q9UNN5 650 aaPredicted RBP12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 SDK1Q7Z5N4 2213 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 ARHGEF17Q96PE2 2063 aaPredicted RBP12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 PRR19A6NJB7 356 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 H0YAE9 185 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 TNFRSF10CO14798 259 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 SLC16A8O95907 504 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 GNAO1P09471 354 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 EBLN1P0CF75 366 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 MTHFD1P11586 935 aaKnown RBP12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 RPL10P27635 214 aaKnown RBP12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 CLCNKAP51800 687 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 TRAF3Q13114 568 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 TCEA2Q15560 299 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 C6orf136Q5SQH8 315 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 LETMD1Q6P1Q0 360 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 DCUN1D3Q8IWE4 304 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 SYTL1Q8IYJ3 562 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 LMNTD1Q8N9Z9 388 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 OR13H1Q8NG92 308 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 PNPT1Q8TCS8 783 aaKnown RBP12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 MAGEE2Q8TD90 523 aaPredicted RBP12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 PYCR2Q96C36 320 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 ISOC1Q96CN7 298 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 MED8Q96G25 268 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 MAGEB10Q96LZ2 347 aaPredicted RBP12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 NSMCE2Q96MF7 247 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 CDK15Q96Q40 435 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 NRTNQ99748 197 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 IER2Q9BTL4 223 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 ACTR8Q9H981 624 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 PLGRKTQ9HBL7 147 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 KLQ9UEF7 1012 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 KCNK6Q9Y257 313 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 SLC22A14Q9Y267 594 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 WDR37Q9Y2I8 494 aa12.69□□□□□ -0.38
SQSTM1-201ENST00000360718 ZDBF2Q9HCK1 2354 aa12.68□□□□□ -0.38
SQSTM1-201ENST00000360718 CLDN9O95484 217 aa12.68□□□□□ -0.38
SQSTM1-201ENST00000360718 CAPN1P07384 714 aa12.68□□□□□ -0.38
SQSTM1-201ENST00000360718 CXCL12P48061 93 aa12.68□□□□□ -0.38
SQSTM1-201ENST00000360718 NAE1Q13564 534 aa12.68□□□□□ -0.38
SQSTM1-201ENST00000360718 Q6ZSR6 202 aa12.68□□□□□ -0.38
SQSTM1-201ENST00000360718 RD3Q7Z3Z2 195 aa12.68□□□□□ -0.38
SQSTM1-201ENST00000360718 GPR180Q86V85 440 aa12.68□□□□□ -0.38
SQSTM1-201ENST00000360718 DPP10Q8N608 796 aa12.68□□□□□ -0.38
SQSTM1-201ENST00000360718 FAM174AQ8TBP5 190 aa12.68□□□□□ -0.38
SQSTM1-201ENST00000360718 TSACCQ96A04 125 aaPredicted RBP12.68□□□□□ -0.38
SQSTM1-201ENST00000360718 SPACA7Q96KW9 195 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms