RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CYP27C1Q4G0S4 372 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 UGT2A3Q6UWM9 527 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 GRASPQ7Z6J2 395 aaPredicted RBP15.83■□□□□ 0.12
SCAF1-201ENST00000360565 DTWD1Q8N5C7 304 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 PIGXQ8TBF5 258 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 ARMC1Q9NVT9 282 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 ITGB1BP2Q9UKP3 347 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 ZNF451Q9Y4E5 1061 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 N6AMT1Q9Y5N5 214 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 OAS3Q9Y6K5 1087 aaKnown RBP15.83■□□□□ 0.12
SCAF1-201ENST00000360565 MYO10Q9HD67 2058 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 RASGRP1O95267 797 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 SLC6A4P31645 630 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 ADRA1AP35348 466 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 GUCA1AP43080 201 aaPredicted RBP15.83■□□□□ 0.12
SCAF1-201ENST00000360565 STT3AP46977 705 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 HLCSP50747 726 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 CRTC2Q53ET0 693 aaPredicted RBP15.83■□□□□ 0.12
SCAF1-201ENST00000360565 USP43Q70EL4 1123 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 CXXC5Q7LFL8 322 aaKnown RBP15.83■□□□□ 0.12
SCAF1-201ENST00000360565 HDDC3Q8N4P3 179 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 KLHL23Q8NBE8 558 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 TRPV1Q8NER1 839 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 TMEM125Q96AQ2 219 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 SPACA7Q96KW9 195 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 ATOH8Q96SQ7 321 aa15.83■□□□□ 0.12
SCAF1-201ENST00000360565 RPS17P08708 135 aaKnown RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 OXTRP30559 389 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 XKP51811 444 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 VBP1P61758 197 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 FAM189BP81408 668 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 ZNF763Q0D2J5 394 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 PON2Q15165 354 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.82■□□□□ 0.123e-10■■■■■ 30.5
SCAF1-201ENST00000360565 CXorf57Q6NSI4 855 aaKnown RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 UBE2J2Q8N2K1 259 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 LMLNQ96KR4 655 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 DPH2Q9BQC3 489 aaPredicted RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 RSPH9Q9H1X1 276 aaPredicted RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 EBF1Q9UH73 591 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 RIMS3Q9UJD0 308 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 CLEC4AQ9UMR7 237 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 TMEM98Q9Y2Y6 226 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 BACE2Q9Y5Z0 518 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 TEX28O15482 410 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 HIST1H2ABP04908 130 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 TFPTP0C1Z6 253 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 PRKAR1AP10644 381 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 CLDN8P56748 225 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 HIST3H2AQ7L7L0 130 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 ADGRG2Q8IZP9 1017 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 AQP11Q8NBQ7 271 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 SLC5A11Q8WWX8 675 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 SORCS1Q8WY21 1168 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 HIST1H2ACQ93077 130 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 ARMC5Q96C12 935 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 TBC1D17Q9HA65 648 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 TRIM39Q9HCM9 518 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 ADAP2Q9NPF8 381 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 RHCGQ9UBD6 479 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 A0A1B0GW55 424 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 DRGXA6NNA5 263 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 ERI3O43414 337 aaKnown RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 PSIP1O75475 530 aaKnown RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 DUX4L2P0CJ85 424 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 DUX4L3P0CJ86 424 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 DUX4L4P0CJ87 422 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 DUX4L5P0CJ88 424 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 DUX4L6P0CJ89 424 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 DUX4L7P0CJ90 424 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 DOC2AQ14183 400 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 SMARCD3Q6STE5 483 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 RNF130Q86XS8 419 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 FAM98AQ8NCA5 519 aaKnown RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 RAB8BQ92930 207 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 OSBPL10Q9BXB5 764 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 WDR26Q9H7D7 661 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 MRPS30Q9NP92 439 aaKnown RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 FARSBQ9NSD9 589 aaKnown RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 GIN1Q9NXP7 522 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 DUX4Q9UBX2 424 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 MRPS33Q9Y291 106 aaKnown RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 RPL36Q9Y3U8 105 aaKnown RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 SMAD6O43541 496 aaKnown RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 OR5F1O95221 314 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 SOX14O95416 240 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 RB1P06400 928 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 H1F0P07305 194 aaKnown RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 SRPRAP08240 638 aaKnown RBP15.82■□□□□ 0.12
SCAF1-201ENST00000360565 C4BPBP20851 252 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 SEC13P55735 322 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 RAB15P59190 212 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 PPIGQ13427 754 aaKnown RBP eCLIP15.82■□□□□ 0.123e-9■■■■□ 21.5
SCAF1-201ENST00000360565 IL18Q14116 193 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 LRRTM4Q86VH4 590 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 RAB43Q86YS6 212 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 OR9A1PQ8NGU1 263 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 SMPDL3AQ92484 453 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 GLYATL1Q969I3 302 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms