RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 BCAS3Q9H6U6 928 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 GALPQ9UBC7 116 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 HS3ST4Q9Y661 456 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 ITGB4P16144 1822 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 TMEM233B4DJY2 109 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 PLOD2O00469 737 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 GATBO75879 557 aaKnown RBP11.87□□□□□ -0.51
DNMT1-202ENST00000359526 TFPIP10646 304 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 VIPR1P32241 457 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 CSKP41240 450 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 UFM1P61960 85 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 SYT16Q17RD7 645 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 ZMIZ2Q8NF64 920 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 OR4F6Q8NGB9 312 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 RGMAQ96B86 450 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 RBM18Q96H35 190 aaKnown RBP11.87□□□□□ -0.51
DNMT1-202ENST00000359526 CDK15Q96Q40 435 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 WRAP53Q9BUR4 548 aaKnown RBP11.87□□□□□ -0.51
DNMT1-202ENST00000359526 UCK2Q9BZX2 261 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 CNOT11Q9UKZ1 510 aaKnown RBP11.87□□□□□ -0.51
DNMT1-202ENST00000359526 SH3PXD2BA1X283 911 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 SOCS5O75159 536 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 ITGA10O75578 1167 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 UBXN7O94888 489 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 TFPTP0C1Z6 253 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 FOSL2P15408 326 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 CSNK2A2P19784 350 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-202ENST00000359526 CPN2P22792 545 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 GLDCP23378 1020 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 HRH2P25021 359 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 ACVR2AP27037 513 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 CD83Q01151 205 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 HMGCS1Q01581 520 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 SLC35G1Q2M3R5 365 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 WSCD2Q2TBF2 565 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 ZNF404Q494X3 552 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 KIAA1614Q5VZ46 1190 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 HACD2Q6Y1H2 254 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 BTN2A1Q7KYR7 527 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 OR8J3Q8NGG0 315 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 CCDC107Q8WV48 283 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 KCNC2Q96PR1 638 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 PSKH2Q96QS6 385 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 TRIB3Q96RU7 358 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 LPIN3Q9BQK8 851 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 MKKSQ9NPJ1 570 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-202ENST00000359526 TDP1Q9NUW8 608 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 TMEM248Q9NWD8 314 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 RGS17Q9UGC6 210 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-202ENST00000359526 RNASEH2AO75792 299 aaKnown RBP11.87□□□□□ -0.51
DNMT1-202ENST00000359526 MSL3P1P0C860 447 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 SPATA31D3P0C874 917 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 NRLP54845 237 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 DNASE1L3Q13609 305 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 UBAP2Q5T6F2 1119 aaKnown RBP11.87□□□□□ -0.51
DNMT1-202ENST00000359526 SPATA31D4Q6ZUB0 917 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 AMZ2Q86W34 360 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 GKN2Q86XP6 184 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 ABCG4Q9H172 646 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 NSUN3Q9H649 340 aaKnown RBP11.87□□□□□ -0.51
DNMT1-202ENST00000359526 ZNF395Q9H8N7 513 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-202ENST00000359526 MALT1Q9UDY8 824 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 NUP50Q9UKX7 468 aa11.87□□□□□ -0.51
DNMT1-202ENST00000359526 MID1O15344 667 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 KDELR3O43731 214 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 MATN4O95460 622 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 NCBP2P52298 156 aaKnown RBP eCLIP11.86□□□□□ -0.51
DNMT1-202ENST00000359526 OR4F3Q6IEY1 312 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 CAND1Q86VP6 1230 aaKnown RBP11.86□□□□□ -0.51
DNMT1-202ENST00000359526 CLIP4Q8N3C7 705 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 TAPBPLQ9BX59 468 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 MRPS30Q9NP92 439 aaKnown RBP11.86□□□□□ -0.51
DNMT1-202ENST00000359526 NLE1Q9NVX2 485 aaPredicted RBP11.86□□□□□ -0.51
DNMT1-202ENST00000359526 WNT9AO14904 365 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 TNFP01375 233 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 HLA-DPB1P04440 258 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 TNFAIP8L2Q6P589 184 aaPredicted RBP11.86□□□□□ -0.51
DNMT1-202ENST00000359526 ZNF517Q6ZMY9 492 aaPredicted RBP11.86□□□□□ -0.51
DNMT1-202ENST00000359526 ASCC1Q8N9N2 400 aaKnown RBP11.86□□□□□ -0.51
DNMT1-202ENST00000359526 TMEM174Q8WUU8 243 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 SLC2A6Q9UGQ3 507 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 FKBP7Q9Y680 259 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 THSD7AQ9UPZ6 1657 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 ARPC4-TTLL3A0A0A6YYG9 625 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 TRBC2A0A5B9 178 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 RHPN2P1A8MT19 583 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 KDM4BO94953 1096 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 GRIA2P42262 883 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 AVPR1BP47901 424 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 SLBPQ14493 270 aaKnown RBP eCLIP11.86□□□□□ -0.51
DNMT1-202ENST00000359526 GDPD4Q6W3E5 623 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 ELMOD2Q8IZ81 293 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 LSM14AQ8ND56 463 aaKnown RBP11.86□□□□□ -0.51
DNMT1-202ENST00000359526 CLCC1Q96S66 551 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 NEUROD4Q9HD90 331 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 OSER1Q9NX31 292 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 RABL2BQ9UNT1 228 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 RBM7Q9Y580 266 aaKnown RBP11.86□□□□□ -0.51
DNMT1-202ENST00000359526 RENP00797 406 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 C1QTNF8P60827 252 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms