RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MLIPQ5VWP3 458 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 MAF1Q9H063 256 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 IRF2BPLQ9H1B7 796 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 CLDN7O95471 211 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 AGR2O95994 175 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.87■□□□□ 0.45
SHANK1-202ENST00000359082 C17orf50Q8WW18 174 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 RFT1Q96AA3 541 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 DPAGT1Q9H3H5 408 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 GRHPRQ9UBQ7 328 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 SNHG28P0DPA3 235 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 SYCE2Q6PIF2 218 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 LMX1AQ8TE12 382 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 ZNF641Q96N77 438 aaPredicted RBP17.87■□□□□ 0.45
SHANK1-202ENST00000359082 EPYCQ99645 322 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 ENY2Q9NPA8 101 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 PLCL2Q9UPR0 1127 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 CDRT1O95170 752 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 SOX14O95416 240 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 GPM6BQ13491 265 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 THAP6Q8TBB0 222 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 ASB12Q8WXK4 309 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 FAM124BQ9H5Z6 455 aaPredicted RBP17.87■□□□□ 0.45
SHANK1-202ENST00000359082 CMAHPQ9Y471 501 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 A0A1W2PPL8 197 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 MMP20O60882 483 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 PRLP01236 227 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 GSTM3P21266 225 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 ACVRL1P37023 503 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 FIP1L1Q6UN15 594 aaKnown RBP17.87■□□□□ 0.45
SHANK1-202ENST00000359082 GALNT11Q8NCW6 608 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 OR5T2Q8NGG2 359 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 SLC22A8Q8TCC7 542 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 C11orf84Q9BUA3 381 aaPredicted RBP17.87■□□□□ 0.45
SHANK1-202ENST00000359082 TMEM5Q9Y2B1 443 aa17.87■□□□□ 0.45
SHANK1-202ENST00000359082 IRAK2O43187 625 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 ATP6V1G1O75348 118 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 DIRAS1O95057 198 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 PVALBP20472 110 aaPredicted RBP17.86■□□□□ 0.45
SHANK1-202ENST00000359082 HSD3B2P26439 372 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 NDUFS1P28331 727 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 DSG2Q14126 1118 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 ACSBG2Q5FVE4 666 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 CEACAM20Q6UY09 585 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 DENND6BQ8NEG7 585 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 FAM46DQ8NEK8 389 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 OR8S1Q8NH09 359 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 UNGP13051 313 aaPredicted RBP17.86■□□□□ 0.45
SHANK1-202ENST00000359082 PPP1R8Q12972 351 aaKnown RBP17.86■□□□□ 0.45
SHANK1-202ENST00000359082 SPRYD7Q5W111 196 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 RAB11FIP2Q7L804 512 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 PHOSPHO1Q8TCT1 267 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 ZNF514Q96K75 400 aaPredicted RBP17.86■□□□□ 0.45
SHANK1-202ENST00000359082 ASPNQ9BXN1 380 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 RHCGQ9UBD6 479 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 AJAP1Q9UKB5 411 aaPredicted RBP17.86■□□□□ 0.45
SHANK1-202ENST00000359082 IGLV3-22A0A075B6J6 115 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 AURKAO14965 403 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 VAMP1P23763 118 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 Q6ZVU0 165 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 DBF4BQ8NFT6 615 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 HERC2P3Q9BVR0 1158 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 CCDC86Q9H6F5 360 aaKnown RBP17.86■□□□□ 0.45
SHANK1-202ENST00000359082 TRIM36Q9NQ86 728 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 CLDND1Q9NY35 253 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 CDH15P55291 814 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 RBM20Q5T481 1227 aaKnown RBP17.86■□□□□ 0.45
SHANK1-202ENST00000359082 FRG2Q64ET8 278 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 NOXRED1Q6NXP6 359 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 OR4F6Q8NGB9 312 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 ASB9Q96DX5 294 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 FRG2BQ96QU4 278 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 OR52B2Q96RD2 323 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 DCSTAMPQ9H295 470 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 FBXL3Q9UKT7 428 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 GPR33Q49SQ1 333 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 TPRG1LQ5T0D9 272 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 NAT8LQ8N9F0 302 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 CANT1Q8WVQ1 401 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 ZNF285Q96NJ3 590 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 ABCD2Q9UBJ2 740 aa17.86■□□□□ 0.45
SHANK1-202ENST00000359082 ADGRB2O60241 1585 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 LOC730098B7Z3J9 87 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 MANBAO00462 879 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 RNF144AP50876 292 aaPredicted RBP17.85■□□□□ 0.45
SHANK1-202ENST00000359082 PTF1AQ7RTS3 328 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 EHD1Q9H4M9 534 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 NOP16Q9Y3C1 178 aaKnown RBP17.85■□□□□ 0.45
SHANK1-202ENST00000359082 CLEC3AO75596 197 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 RCBTB2O95199 551 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 CKMT2P17540 419 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 BMP8BP34820 402 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 RPS13P62277 151 aaKnown RBP17.85■□□□□ 0.45
SHANK1-202ENST00000359082 HERC3Q15034 1050 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 DRICH1Q6PGQ1 229 aaPredicted RBP17.85■□□□□ 0.45
SHANK1-202ENST00000359082 BMP8AQ7Z5Y6 402 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 PIGWQ7Z7B1 504 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 C9orf43Q8TAL5 461 aaPredicted RBP17.85■□□□□ 0.45
SHANK1-202ENST00000359082 AKAP1Q92667 903 aaKnown RBP eCLIP17.85■□□□□ 0.45
SHANK1-202ENST00000359082 ST6GALNAC4Q9H4F1 302 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms