RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 STK19P49842 368 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 ATN1P54259 1190 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 C2orf80Q0P641 193 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 EXOC3L2Q2M3D2 409 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 TBRG1Q3YBR2 411 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 PRSS36Q5K4E3 855 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 RTP2Q5QGT7 225 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF57Q68EA5 555 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 ERICH5Q6P6B1 374 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF517Q6ZMY9 492 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 TRMT11Q7Z4G4 463 aaKnown RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 TRIM69Q86WT6 500 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 GALNT12Q8IXK2 581 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 NAGSQ8N159 534 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 C19orf18Q8NEA5 215 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 DYNC2LI1Q8TCX1 351 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 CSGALNACT1Q8TDX6 532 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 FOXJ1Q92949 421 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 SCAMP4Q969E2 229 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 NACC2Q96BF6 587 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF486Q96H40 463 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 MS4A4AQ96JQ5 239 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 POLR2J2Q9GZM3 115 aaKnown RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 PAQR5Q9NXK6 330 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 SLC13A4Q9UKG4 626 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 KNL1Q8NG31 2342 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 OR6C75A6NL08 312 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 DRGXA6NNA5 263 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 H7C4K7 107 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 J3KTA2 159 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ADAMDEC1O15204 470 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 DYRK3O43781 588 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 PTHP01270 115 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ACPPP15309 386 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF24P17028 368 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 BPIP17213 487 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 GJA1P17302 382 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 GPC1P35052 558 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ZFP36L2P47974 494 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 FLT3LGP49771 235 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 CLCN4P51793 760 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ACVR1Q04771 509 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 MRPL28Q13084 256 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 PPIGQ13427 754 aaKnown RBP eCLIP6.35□□□□□ -1.396e-6■□□□□ 9.4
CSDE1-203ENST00000358528 IFI44LQ53G44 452 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 C10orf62Q5T681 223 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 LRRC66Q68CR7 880 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TXNDC8Q6A555 127 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 KLHL17Q6TDP4 642 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SERPINA13PQ6UXR4 307 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SERINC5Q86VE9 423 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 CACUL1Q86Y37 369 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 DTX3Q8N9I9 347 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 AQP11Q8NBQ7 271 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 FBXO22Q8NEZ5 403 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 UPF1Q92900 1129 aaKnown RBP eCLIP6.35□□□□□ -1.392e-6■■□□□ 14.2
CSDE1-203ENST00000358528 MGLLQ99685 303 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SLC30A2Q9BRI3 323 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TMEM246Q9BRR3 403 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 CCM2Q9BSQ5 444 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 MMP28Q9H239 520 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SLC52A3Q9NQ40 469 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SIP14410 1827 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 LCTP09848 1927 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TTC34A8MYJ7 566 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 FAM25AB3EWG3 89 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 FAM25CB3EWG5 89 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 FAM25GB3EWG6 89 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF623O75123 536 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 CPNE3O75131 537 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 PTNP21246 168 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SSTR4P31391 388 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 CA5AP35218 305 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 HMGCLP35914 325 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 IL12RB1P42701 662 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 NSG1P42857 185 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 PREPP48147 710 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TUFMP49411 452 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 RPS26P62854 115 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ARF5P84085 180 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SRSF11Q05519 484 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 BCL7AQ4VC05 210 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ATP13A5Q4VNC0 1218 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 CLLU1OSQ5K130 101 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TRIQKQ629K1 86 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF544Q6NX49 715 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 USP45Q70EL2 814 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 KRT73Q86Y46 540 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ENTHD1Q8IYW4 607 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 APCDD1Q8J025 514 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 NXPE1Q8N323 547 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 OTUB1Q96FW1 271 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ASPNQ9BXN1 380 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TMEM121BQ9BXQ6 578 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TVP23BQ9NYZ1 205 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 COMMD3Q9UBI1 195 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF639Q9UID6 485 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 FBXO10Q9UK96 956 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 PPT2Q9UMR5 302 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 PCDHGA3Q9Y5H0 932 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms