RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 HYAL3O43820 417 aaPredicted RBP14.58□□□□□ -0.07
TPM1-206ENST00000358278 LCMT2O60294 686 aaKnown RBP14.58□□□□□ -0.07
TPM1-206ENST00000358278 EIF2S1P05198 315 aaKnown RBP14.58□□□□□ -0.07
TPM1-206ENST00000358278 MSL3P1P0C860 447 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 PCNAP12004 261 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 HGFP14210 728 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 SLC1A6P48664 564 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 VSX2P58304 361 aaPredicted RBP14.58□□□□□ -0.07
TPM1-206ENST00000358278 ABCE1P61221 599 aaKnown RBP14.58□□□□□ -0.07
TPM1-206ENST00000358278 BST1Q10588 318 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 TTC19Q6DKK2 380 aaPredicted RBP14.58□□□□□ -0.07
TPM1-206ENST00000358278 FRMPD2BQ6IN97 320 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 DGLUCYQ7Z3D6 616 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 CUZD1Q86UP6 607 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 MARCH9Q86YJ5 346 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.58□□□□□ -0.07
TPM1-206ENST00000358278 TTLQ8NG68 377 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 OR6Y1Q8NGX8 325 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 WDR36Q8NI36 951 aaKnown RBP14.58□□□□□ -0.07
TPM1-206ENST00000358278 LRRC8CQ8TDW0 803 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 REPS1Q96D71 796 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 THAP11Q96EK4 314 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 OR2A5Q96R48 311 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 SARGQ9BW04 601 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 TRPS1Q9UHF7 1281 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 ZNF225Q9UK10 706 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 RARRES3Q9UL19 164 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 SATB2Q9UPW6 733 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 PCDHGA11Q9Y5H2 935 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 AKAP13Q12802 2813 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 LOC105369274A0A096LPK9 316 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 LOC102723532A0A0G2JNH3 316 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 ANKDD1BA6NHY2 528 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 H0YGG7 62 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 LYPLA1O75608 230 aaPredicted RBP14.58□□□□□ -0.08
TPM1-206ENST00000358278 SERPIND1P05546 499 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 ENO1P06733 434 aaKnown RBP14.58□□□□□ -0.08
TPM1-206ENST00000358278 CCL4P13236 92 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 ITIH1P19827 911 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 HMOX2P30519 316 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 AHRP35869 848 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 SCTRP47872 440 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 GABRA4P48169 554 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 MAPK10P53779 464 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 ARF3P61204 181 aaPredicted RBP14.58□□□□□ -0.08
TPM1-206ENST00000358278 CYP4F2P78329 520 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 GALNT1Q10472 559 aaPredicted RBP14.58□□□□□ -0.08
TPM1-206ENST00000358278 DDX39BQ13838 428 aaKnown RBP14.58□□□□□ -0.08
TPM1-206ENST00000358278 ZRSR2Q15696 482 aaKnown RBP14.58□□□□□ -0.08
TPM1-206ENST00000358278 GPR135Q8IZ08 494 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 OR4N4Q8N0Y3 316 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 LSMEM2Q8N112 164 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 ZNF655Q8N720 491 aaPredicted RBP14.58□□□□□ -0.08
TPM1-206ENST00000358278 ANKRD53Q8N9V6 530 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 MFSD9Q8NBP5 474 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 AGR3Q8TD06 166 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 CCT6BQ92526 530 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 PRR11Q96HE9 360 aaPredicted RBP14.58□□□□□ -0.08
TPM1-206ENST00000358278 PISDQ9UG56 409 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 ZFP69BQ9UJL9 534 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 SERTAD3Q9UJW9 196 aa14.58□□□□□ -0.08
TPM1-206ENST00000358278 CEP295Q9C0D2 2601 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 KCNE1BA0A087WTH5 132 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 H0YIV9 168 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 POLR1CO15160 346 aaPredicted RBP14.57□□□□□ -0.08
TPM1-206ENST00000358278 NDUFS4O43181 175 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 ITM2AO43736 263 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 SRPX2O60687 465 aaPredicted RBP14.57□□□□□ -0.08
TPM1-206ENST00000358278 OR2B3O76000 313 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 STATHP02808 62 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 CAPN1P07384 714 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 SLC35G6P0C7Q6 338 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 ARRB2P32121 409 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 ITGA1P56199 1179 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 PHEXP78562 749 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 MC2RQ01718 297 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 IFT88Q13099 833 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 TCTE1Q5JU00 501 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 SH2D4BQ5SQS7 431 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 CES4AQ5XG92 561 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 BMPERQ8N8U9 685 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 OR7G3Q8NG95 312 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 METTL6Q8TCB7 284 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 ZNF75CPQ92670 426 aaPredicted RBP14.57□□□□□ -0.08
TPM1-206ENST00000358278 ZNF501Q96CX3 271 aaPredicted RBP14.57□□□□□ -0.08
TPM1-206ENST00000358278 KCNA7Q96RP8 456 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 NLNQ9BYT8 704 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 SLC29A3Q9BZD2 475 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 ELOVL6Q9H5J4 265 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 NT5DC2Q9H857 520 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 SLC39A1Q9NY26 324 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 SNX6Q9UNH7 406 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 FIS1Q9Y3D6 152 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 AP1M2Q9Y6Q5 423 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 CACNA1AO00555 2505 aa14.57□□□□□ -0.08
TPM1-206ENST00000358278 SDK2Q58EX2 2172 aa14.56□□□□□ -0.08
TPM1-206ENST00000358278 B4E171 279 aa14.56□□□□□ -0.08
TPM1-206ENST00000358278 SNUPNO95149 360 aaKnown RBP14.56□□□□□ -0.08
TPM1-206ENST00000358278 KRT6AP02538 564 aa14.56□□□□□ -0.08
TPM1-206ENST00000358278 KRT6BP04259 564 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms