RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 B3GNT5Q9BYG0 378 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 SLAMF7Q9NQ25 335 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 PPP4R1LQ9P1A2 415 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 CAMK2AQ9UQM7 478 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 CPQQ9Y646 472 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 E7ENQ6 273 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 LCMT2O60294 686 aaKnown RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 PAX3P23760 479 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 MPSTP25325 297 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 RBM34P42696 430 aaKnown RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 ZNF268Q14587 947 aaPredicted RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 RSU1Q15404 277 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 OR5B17Q8NGF7 314 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 OR14L1PQ8NHC6 308 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 FRZBQ92765 325 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 NDUFA13Q9P0J0 144 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 HPSEQ9Y251 543 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 NPFFR2Q9Y5X5 522 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 KLRG2A4D1S0 409 aaPredicted RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 LRRN3E7EW58 273 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 GADD45GO95257 159 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 POLR2JP52435 117 aaKnown RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 OAZ1P54368 228 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 CDK18Q07002 472 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 TIGD2Q4W5G0 525 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 ZNF542PQ5EBM4 170 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 DHDDSQ86SQ9 333 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 OR2T27Q8NH04 317 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 ZNF75CPQ92670 426 aaPredicted RBP9.51□□□□□ -0.89
CHD3-202ENST00000358181 TIFAQ96CG3 184 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 KIDINS220Q9ULH0 1771 aa9.51□□□□□ -0.89
CHD3-202ENST00000358181 TEX51A0A1B0GUA7 166 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 WNT7AO00755 349 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 GLSO94925 669 aaPredicted RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 ALPIP09923 528 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 NNATQ16517 81 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 C6orf141Q5SZD1 244 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 FAM83HQ6ZRV2 1179 aaPredicted RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 SMIM15Q7Z3B0 74 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 RIPK3Q9Y572 518 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 SNX10Q9Y5X0 201 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 NOBOXO60393 691 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 ENTPD5O75356 428 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 INHAP05111 366 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 COL6A2P12110 1019 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 GCH1P30793 250 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 CASP7P55210 303 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 ADAM17P78536 824 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 COL9A3Q14050 684 aaPredicted RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 OGFOD2Q6N063 350 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 VSIG10LQ86VR7 867 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 STK32AQ8WU08 396 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 BPIFA2Q96DR5 249 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 CDH20Q9HBT6 801 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 CREBZFQ9NS37 354 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 ZDHHC3Q9NYG2 299 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 A0A0J9YYE9 177 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 ADH5P11766 374 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 CHRNEQ04844 493 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 PAN3Q58A45 887 aaKnown RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 PAOXQ6QHF9 649 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 RHBDD1Q8TEB9 315 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 C7orf34Q96L11 122 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 RNF157Q96PX1 679 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 C11orf84Q9BUA3 381 aaPredicted RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 RXFP1Q9HBX9 757 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 PDE10AQ9Y233 779 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 MED16Q9Y2X0 877 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 E9PAM4 449 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 CRXO43186 299 aaPredicted RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 RHCEP18577 417 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 PTGS2P35354 604 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 CCR8P51685 355 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 CHIT1Q13231 466 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 EIF2B1Q14232 305 aaKnown RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 RFTN2Q52LD8 501 aaPredicted RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 KIAA0895LQ68EN5 471 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 SLITRK4Q8IW52 837 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 AADATQ8N5Z0 425 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 KREMEN2Q8NCW0 462 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 CERS2Q96G23 380 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 ZNF681Q96N22 645 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 KCNC2Q96PR1 638 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 IL1RAPQ9NPH3 570 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 EIF2B4Q9UI10 523 aaKnown RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 NWD1Q149M9 1564 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 CRYM-AS1A6NIL9 109 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 ABCB7O75027 752 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 POLR2CP19387 275 aaPredicted RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 GLDCP23378 1020 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 VSX2P58304 361 aaPredicted RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 MERTKQ12866 999 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 ADGRE1Q14246 886 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 GNMTQ14749 295 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 TMEM119Q4V9L6 283 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 KIAA0319Q5VV43 1072 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 CLEC6AQ6EIG7 209 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 B3GNT6Q6ZMB0 384 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 RBM44Q6ZP01 1051 aaKnown RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 ZNF578Q96N58 590 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms