RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 L3MBTL4Q8NA19 623 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 MFSD9Q8NBP5 474 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 TRPV3Q8NET8 790 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 OR1L3Q8NH93 324 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 TRPC4APQ8TEL6 797 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 USP7Q93009 1102 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 CNDP1Q96KN2 507 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 ZNF285Q96NJ3 590 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 CTRCQ99895 268 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 TRMOQ9BU70 441 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 MECRQ9BV79 373 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 APMAPQ9HDC9 416 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 ZFP69BQ9UJL9 534 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 PCDHGA11Q9Y5H2 935 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 B3GALT1Q9Y5Z6 326 aa14.87□□□□□ -0.03
TRIM13-201ENST00000356017 LOC105369274A0A096LPK9 316 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 LOC102723532A0A0G2JNH3 316 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 PMS2P1A4D2B8 440 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 LCMT2O60294 686 aaKnown RBP14.86□□□□□ -0.03
TRIM13-201ENST00000356017 PRAMEF4O60810 478 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 SERPINB5P36952 375 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 BCL6P41182 706 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 SCTRP47872 440 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 PKNOX1P55347 436 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 VSX2P58304 361 aaPredicted RBP14.86□□□□□ -0.03
TRIM13-201ENST00000356017 GRM7Q14831 915 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 WASHC2DQ5SRD0 308 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 YOD1Q5VVQ6 348 aaPredicted RBP14.86□□□□□ -0.03
TRIM13-201ENST00000356017 PRAMEF9Q5VWM5 478 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 MED27Q6P2C8 311 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 FRMD7Q6ZUT3 714 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 TMEM126BQ8IUX1 230 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 OR4N4Q8N0Y3 316 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 CAMKVQ8NCB2 501 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 ZNF740Q8NDX6 193 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 OR52B6Q8NGF0 335 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 PPP1R14CQ8TAE6 165 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 REPS1Q96D71 796 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 ZNF382Q96SR6 550 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 PAIP2Q9BPZ3 127 aaKnown RBP14.86□□□□□ -0.03
TRIM13-201ENST00000356017 GSTO2Q9H4Y5 243 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 THSD1Q9NS62 852 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 ADGRE2Q9UHX3 823 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 PCDHB3Q9Y5E6 796 aa14.86□□□□□ -0.03
TRIM13-201ENST00000356017 FITM1A5D6W6 292 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 ANKDD1BA6NHY2 528 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 ZSCAN9O15535 394 aaPredicted RBP14.85□□□□□ -0.03
TRIM13-201ENST00000356017 SCRG1O75711 98 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 EIF2S1P05198 315 aaKnown RBP14.85□□□□□ -0.03
TRIM13-201ENST00000356017 HBQ1P09105 142 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 SLC35G6P0C7Q6 338 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 NEFHP12036 1026 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 CD22P20273 847 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 CD82P27701 267 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 SERPINB1P30740 379 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 ARSFP54793 590 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 EMP3P54852 163 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 ERVPABLB-1P60509 514 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 TRAF3Q13114 568 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 PWP1Q13610 501 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 FAM214AQ32MH5 1076 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 GGTA1PQ4G0N0 100 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 C10orf62Q5T681 223 aaPredicted RBP14.85□□□□□ -0.03
TRIM13-201ENST00000356017 PWWP2BQ6NUJ5 590 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 RPS27LQ71UM5 84 aaKnown RBP14.85□□□□□ -0.03
TRIM13-201ENST00000356017 HOMEZQ8IX15 550 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 LAS2Q8IYD9 372 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 CSNK1A1LQ8N752 337 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 TTC29Q8NA56 475 aaPredicted RBP14.85□□□□□ -0.03
TRIM13-201ENST00000356017 SLC13A3Q8WWT9 602 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 GATA5Q9BWX5 397 aaPredicted RBP14.85□□□□□ -0.03
TRIM13-201ENST00000356017 SLC7A5P2Q9GIP4 190 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 SPNS1Q9H2V7 528 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 SRPK3Q9UPE1 567 aa14.85□□□□□ -0.03
TRIM13-201ENST00000356017 CDRT15L2A8MXV6 281 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 C9orf172C9J069 976 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 H0YIV9 168 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 H3BMH7 237 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 NPHS1O60500 1241 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 GALNT1Q10472 559 aaPredicted RBP14.84□□□□□ -0.03
TRIM13-201ENST00000356017 CPSF6Q16630 551 aaKnown RBP eCLIP14.84□□□□□ -0.03
TRIM13-201ENST00000356017 GPRIN3Q6ZVF9 776 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 ASPGQ86U10 573 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 OR4F6Q8NGB9 312 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 TM4SF19Q96DZ7 209 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 ZNF578Q96N58 590 aaPredicted RBP14.84□□□□□ -0.03
TRIM13-201ENST00000356017 CDK15Q96Q40 435 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 NDC1Q9BTX1 674 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 ULBP3Q9BZM4 244 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 SPRTNQ9H040 489 aaPredicted RBP14.84□□□□□ -0.03
TRIM13-201ENST00000356017 RHBGQ9H310 441 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 EML4Q9HC35 981 aaKnown RBP14.84□□□□□ -0.03
TRIM13-201ENST00000356017 ASCL3Q9NQ33 180 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 TRPS1Q9UHF7 1281 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 ZNF490Q9ULM2 529 aaPredicted RBP14.84□□□□□ -0.03
TRIM13-201ENST00000356017 RNF11Q9Y3C5 154 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 TSC22D4Q9Y3Q8 395 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 WDR91A4D1P6 747 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 NDUFS4O43181 175 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 ZNF749O43361 778 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms