RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PSORS1C1Q9UIG5 152 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 RUVBL1Q9Y265 456 aaKnown RBP23.69■■□□□ 1.38
CPNE1-202ENST00000352393 PADI2Q9Y2J8 665 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 PPIL1Q9Y3C6 166 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 M0R082 166 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 SCAMP2O15127 329 aaKnown RBP23.69■■□□□ 1.38
CPNE1-202ENST00000352393 OLFM2O95897 454 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 ELP6Q0PNE2 266 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 CDC20Q12834 499 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 MLIPQ5VWP3 458 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 TSEN54Q7Z6J9 526 aaKnown RBP23.69■■□□□ 1.38
CPNE1-202ENST00000352393 RASGRP3Q8IV61 690 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 ARL14EPQ8N8R7 260 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-202ENST00000352393 SLC35B4Q969S0 331 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 MMP27Q9H306 513 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 FKBP14Q9NWM8 211 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 FZD4Q9ULV1 537 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 FAM32AQ9Y421 112 aaKnown RBP23.69■■□□□ 1.38
CPNE1-202ENST00000352393 RFPL2O75678 378 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 UPK1BO75841 260 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 C1SP09871 688 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 PCGF2P35227 344 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 GGT2P36268 569 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 IRF8Q02556 426 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 SYT16Q17RD7 645 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 ZNF404Q494X3 552 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 TPGS2Q68CL5 300 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 GPR153Q6NV75 609 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 P3H2Q8IVL5 708 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 STARD8Q92502 1023 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 HPS1Q92902 700 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 DUSP26Q9BV47 211 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 ANKMY1Q9P2S6 941 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 BTNL2Q9UIR0 455 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 PCDHGB3Q9Y5G1 929 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 BRCA2P51587 3418 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-202ENST00000352393 SUV39H1O43463 412 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 AIREO43918 545 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 RRM2P31350 389 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 CD70P32970 193 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 CLK1P49759 484 aaKnown RBP23.68■■□□□ 1.38
CPNE1-202ENST00000352393 SERPINA13PQ6UXR4 307 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 Q6ZPB1 254 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-202ENST00000352393 DNAJB7Q7Z6W7 309 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-202ENST00000352393 CDC26Q8NHZ8 85 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 PSMA8Q8TAA3 256 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 KCNC2Q96PR1 638 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 BBS2Q9BXC9 721 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 SP140LQ9H930 580 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 STARD7Q9NQZ5 370 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 SACM1LQ9NTJ5 587 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 ADPRHL2Q9NX46 363 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 ITGB1BP2Q9UKP3 347 aa23.68■■□□□ 1.38
CPNE1-202ENST00000352393 ISPDA4D126 451 aa23.67■■□□□ 1.38
CPNE1-202ENST00000352393 VIPP01282 170 aa23.67■■□□□ 1.38
CPNE1-202ENST00000352393 GAB1Q13480 694 aa23.67■■□□□ 1.38
CPNE1-202ENST00000352393 KIAA1841Q6NSI8 718 aa23.67■■□□□ 1.38
CPNE1-202ENST00000352393 TUBA3EQ6PEY2 450 aa23.67■■□□□ 1.38
CPNE1-202ENST00000352393 ARMC8Q8IUR7 673 aa23.67■■□□□ 1.38
CPNE1-202ENST00000352393 LYSMD2Q8IV50 215 aa23.67■■□□□ 1.38
CPNE1-202ENST00000352393 DNAJC22Q8N4W6 341 aa23.67■■□□□ 1.38
CPNE1-202ENST00000352393 ZNF334Q9HCZ1 680 aaPredicted RBP23.67■■□□□ 1.38
CPNE1-202ENST00000352393 ZNF451Q9Y4E5 1061 aa23.67■■□□□ 1.38
CPNE1-202ENST00000352393 LYVE1Q9Y5Y7 322 aa23.67■■□□□ 1.38
CPNE1-202ENST00000352393 PPIBP23284 216 aaKnown RBP23.66■■□□□ 1.38
CPNE1-202ENST00000352393 SLC19A1P41440 591 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 CTSKP43235 329 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 ACSM2AQ08AH3 577 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 ACSM2BQ68CK6 577 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 PROX1Q92786 737 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 ERLEC1Q96DZ1 483 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 MTERF1Q99551 399 aaKnown RBP23.66■■□□□ 1.38
CPNE1-202ENST00000352393 DOHHQ9BU89 302 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 CPNE5Q9HCH3 593 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 VPS4AQ9UN37 437 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 CORO2BQ9UQ03 480 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 A3GALT2U3KPV4 340 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 HTTP42858 3142 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 TAF4O00268 1085 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 GCM2O75603 506 aaPredicted RBP23.66■■□□□ 1.38
CPNE1-202ENST00000352393 ABCB1P08183 1280 aaPredicted RBP23.66■■□□□ 1.38
CPNE1-202ENST00000352393 SRCP12931 536 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 ATP1B2P14415 290 aaPredicted RBP23.66■■□□□ 1.38
CPNE1-202ENST00000352393 GADD45AP24522 165 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 C21orf33P30042 268 aaPredicted RBP23.66■■□□□ 1.38
CPNE1-202ENST00000352393 RGNQ15493 299 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 SF1Q15637 639 aaKnown RBP23.66■■□□□ 1.38
CPNE1-202ENST00000352393 TXNDC8Q6A555 127 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 CAMKMTQ7Z624 323 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 CEP44Q9C0F1 390 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 RNF186Q9NXI6 227 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 SLCO3A1Q9UIG8 710 aa23.66■■□□□ 1.38
CPNE1-202ENST00000352393 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.66■■□□□ 1.38
CPNE1-202ENST00000352393 GPC6Q9Y625 555 aaPredicted RBP23.66■■□□□ 1.38
CPNE1-202ENST00000352393 HTR3EA5X5Y0 456 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 CDK1P06493 297 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 GSSP48637 474 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 STK19P49842 368 aaPredicted RBP23.65■■□□□ 1.38
CPNE1-202ENST00000352393 SNRPD1P62314 119 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms