RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 NPAS1Q99742 590 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 GSX2Q9BZM3 304 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 RANBP3Q9H6Z4 567 aaPredicted RBP12.83□□□□□ -0.36
IFT88-202ENST00000351808 HHATLQ9HCP6 504 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 PIGVQ9NUD9 493 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 SDHAF2Q9NX18 166 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 KIAA1217Q5T5P2 1943 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 hCG_1807616A0A1W2PRN6 198 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 SLC22A23A1A5C7 686 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 CBX4O00257 560 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 PSMD3O43242 534 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 PSIP1O75475 530 aaKnown RBP12.83□□□□□ -0.36
IFT88-202ENST00000351808 HMGN1P05114 100 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 NPR1P16066 1061 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 CXCR3P49682 368 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 HNRNPA0Q13151 305 aaKnown RBP12.83□□□□□ -0.36
IFT88-202ENST00000351808 PTGR1Q14914 329 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 ZNF169Q14929 603 aaPredicted RBP12.83□□□□□ -0.36
IFT88-202ENST00000351808 RUNDC3AQ59EK9 446 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 RTL4Q6ZR62 310 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 EIF3MQ7L2H7 374 aaKnown RBP12.83□□□□□ -0.36
IFT88-202ENST00000351808 CILP2Q8IUL8 1156 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 CDAN1Q8IWY9 1227 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 PLPP6Q8IY26 295 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 Q8N402 240 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 MS4A15Q8N5U1 240 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 LRRC17Q8N6Y2 441 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 SRFBP1Q8NEF9 429 aaKnown RBP12.83□□□□□ -0.36
IFT88-202ENST00000351808 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.83□□□□□ -0.36
IFT88-202ENST00000351808 CREB3L4Q8TEY5 395 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 NUSAP1Q9BXS6 441 aaKnown RBP12.83□□□□□ -0.36
IFT88-202ENST00000351808 CDT1Q9H211 546 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 OR51B5Q9H339 312 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 ZCCHC4Q9H5U6 513 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 RERGLQ9H628 205 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 MARCH4Q9P2E8 410 aaPredicted RBP12.83□□□□□ -0.36
IFT88-202ENST00000351808 STRCQ7RTU9 1775 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 ANK1P16157 1881 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 I6L893 689 aaPredicted RBP12.82□□□□□ -0.36
IFT88-202ENST00000351808 AKAP8O43823 692 aaKnown RBP12.82□□□□□ -0.36
IFT88-202ENST00000351808 OR1I1O60431 355 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 HRGP04196 525 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 LHCGRP22888 699 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 HTR6P50406 440 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 KIAA0040Q15053 153 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 CCDC85BQ15834 202 aaPredicted RBP12.82□□□□□ -0.36
IFT88-202ENST00000351808 RFTN2Q52LD8 501 aaPredicted RBP12.82□□□□□ -0.36
IFT88-202ENST00000351808 PRR5LQ6MZQ0 368 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 FAHD1Q6P587 224 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 BHLHB9Q6PI77 547 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 ZNF655Q8N720 491 aaPredicted RBP12.82□□□□□ -0.36
IFT88-202ENST00000351808 TBC1D20Q96BZ9 403 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 TAPBPLQ9BX59 468 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 REG4Q9BYZ8 158 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 MED28Q9H204 178 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 CRISPLD1Q9H336 500 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 ZNF226Q9NYT6 803 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 SLC6A14Q9UN76 642 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 SOWAHBA6NEL2 793 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 F8W036 122 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 LGALS8O00214 317 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 AP2A2O94973 939 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 S1PR4O95977 384 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 PTPRRQ15256 657 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 NR6A1Q15406 480 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 ERICH5Q6P6B1 374 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 C17orf107Q6ZR85 190 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 OTOP2Q7RTS6 562 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 DNAJC5GQ8N7S2 189 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 UTP15Q8TED0 518 aaKnown RBP12.82□□□□□ -0.36
IFT88-202ENST00000351808 FSD1LQ9BXM9 530 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 RBCK1Q9BYM8 510 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 REEP1Q9H902 201 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 HEBP1Q9NRV9 189 aa12.82□□□□□ -0.36
IFT88-202ENST00000351808 CFAP20Q9Y6A4 193 aaKnown RBP12.82□□□□□ -0.36
IFT88-202ENST00000351808 COL2A1P02458 1487 aaPredicted RBP12.82□□□□□ -0.36
IFT88-202ENST00000351808 A0A0A6YYJ9 748 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 PRAMEF33A0A0G2JMD5 474 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 PRAMEF10O60809 474 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 RNGTTO60942 597 aaKnown RBP12.81□□□□□ -0.36
IFT88-202ENST00000351808 WDPCPO95876 746 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 FABP3P05413 133 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 CKMT1AP12532 417 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 IL1RNP18510 177 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 AKT1P31749 480 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 AGFG1P52594 562 aaKnown RBP12.81□□□□□ -0.36
IFT88-202ENST00000351808 RPL6Q02878 288 aaKnown RBP12.81□□□□□ -0.36
IFT88-202ENST00000351808 LAMTOR4Q0VGL1 99 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 EIF4HQ15056 248 aaKnown RBP12.81□□□□□ -0.36
IFT88-202ENST00000351808 P2RY14Q15391 338 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 KLHL22Q53GT1 634 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 SPANXN4Q5MJ08 99 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 KIAA0907Q7Z7F0 614 aaPredicted RBP12.81□□□□□ -0.36
IFT88-202ENST00000351808 STPG2Q8N412 459 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 TMEM145Q8NBT3 493 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 EMID1Q96A84 441 aaPredicted RBP12.81□□□□□ -0.36
IFT88-202ENST00000351808 PDXPQ96GD0 296 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 KATNAL1Q9BW62 490 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 RNF112Q9ULX5 631 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 NCKAP1Q9Y2A7 1128 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms