RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ANKRD12Q6UB98 2062 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 C7orf72A4D263 438 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 MAGEA13PA6NCF6 341 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 GABRR3A8MPY1 467 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 CACNB4O00305 520 aaPredicted RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 SCAMP2O15127 329 aaKnown RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 AKAP10O43572 662 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 PRICKLE3O43900 615 aaPredicted RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 SEMA3DO95025 777 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 PRSS23O95084 383 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 LRATO95237 230 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 TBX6O95947 436 aaPredicted RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 B3GALT4O96024 378 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 IGLV3-19P01714 112 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 ANXA4P09525 319 aaPredicted RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 SLC35G4P0C7Q5 338 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 LAMP1P11279 417 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 PCNAP12004 261 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 CDH1P12830 882 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 ACP5P13686 325 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 GPX2P18283 190 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 IDSP22304 550 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 FASP25445 335 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 PSMA4P25789 261 aaKnown RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 PKLRP30613 574 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 SERPINB1P30740 379 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 HSPA13P48723 471 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 CCT8P50990 548 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 POLE2P56282 527 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 PLIN5Q00G26 463 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 FOLH1Q04609 750 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 PRKCQQ04759 706 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 ABHD18Q0P651 414 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 SFSWAPQ12872 951 aaKnown RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 DDX39BQ13838 428 aaKnown RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 CCINQ13939 588 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 PDE7AQ13946 482 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 CLCA4Q14CN2 919 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 SF1Q15637 639 aaKnown RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 ATP6AP1Q15904 470 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 CYP51A1Q16850 503 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 PGS1Q32NB8 556 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 UAP1L1Q3KQV9 507 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 EOGTQ5NDL2 527 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 TBCELQ5QJ74 424 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 INTS11Q5TA45 600 aaKnown RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 FAM71E1Q6IPT2 247 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 TMEM92Q6UXU6 159 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 WASH2PQ6VEQ5 465 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 EP400NLQ6ZTU2 488 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 CHST15Q7LFX5 561 aaPredicted RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 ZNF551Q7Z340 670 aaPredicted RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 COMMD6Q7Z4G1 85 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 SPRED1Q7Z699 444 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 AMIGO2Q86SJ2 522 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 C17orf64Q86WR6 236 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 MICU2Q8IYU8 434 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 KRT78Q8N1N4 520 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 C10orf111Q8N326 155 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 PGBD3Q8N328 593 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 TMEM132CQ8N3T6 1108 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 PACRGLQ8N7B6 248 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 MFSD2AQ8NA29 543 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 LINC01555Q8NAE3 123 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 ICA1LQ8NDH6 482 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 ZNF740Q8NDX6 193 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 TNIP2Q8NFZ5 429 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 OR2T12Q8NG77 320 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 OR7A2PQ8NGA2 310 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 OR2L8Q8NGY9 312 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 OR10A6Q8NH74 314 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 N4BP2L2Q92802 583 aaPredicted RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 POP5Q969H6 163 aaKnown RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 MIEF2Q96C03 454 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 CENPNQ96H22 339 aaPredicted RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 REXO5Q96IC2 774 aaKnown RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 NSMCE2Q96MF7 247 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 CAMK1GQ96NX5 476 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 GBP5Q96PP8 586 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 SLC29A1Q99808 456 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 TWSG1Q9GZX9 223 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 MVB12BQ9H7P6 319 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 COQ10BQ9H8M1 238 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 FGF22Q9HCT0 170 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 MYNNQ9NPC7 610 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 C8orf4Q9NR00 106 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 OLAHQ9NV23 265 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 ZNF639Q9UID6 485 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 MMP17Q9ULZ9 603 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 PLAGL1Q9UM63 463 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 SUFUQ9UMX1 484 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 NCKAP1Q9Y2A7 1128 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 PLEKHM1Q9Y4G2 1056 aa6.65□□□□□ -1.34
TRIM55-203ENST00000350034 ZFC3H1O60293 1989 aaKnown RBP6.65□□□□□ -1.34
TRIM55-203ENST00000350034 REV3LO60673 3130 aa6.65□□□□□ -1.35
TRIM55-203ENST00000350034 TBC1D3DA0A087WVF3 549 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TBC1D3IA0A087WXS9 549 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TBC1D3EA0A087X179 549 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 TBC1D3KA0A087X1G2 549 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 C1orf226A1L170 272 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms