RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 BLOC1S1P78537 153 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 ADAM15Q13444 863 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 MTMR14Q8NCE2 650 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 ABHD11Q8NFV4 315 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 CD300LFQ8TDQ1 290 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 NCSTNQ92542 709 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 ZNF354BQ96LW1 612 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 ZNF607Q96SK3 696 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 IPPKQ9H8X2 491 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 LRTM1Q9HBL6 345 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 NECTIN3Q9NQS3 549 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 C14orf119Q9NWQ9 140 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 ARL5AQ9Y689 179 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 CDC7O00311 574 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 SULT1C2O00338 296 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 TO15178 435 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 VAMP1P23763 118 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 UBXN2BQ14CS0 331 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 DCUN1D3Q8IWE4 304 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 SETD6Q8TBK2 473 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 TWIST2Q8WVJ9 160 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 ZBED3Q96IU2 234 aaPredicted RBP10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 BCL7BQ9BQE9 202 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 FBXW2Q9UKT8 454 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 ZNF214Q9UL59 606 aaPredicted RBP10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 PLLPQ9Y342 182 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 TCAF1Q9Y4C2 921 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 NFKBIEO00221 500 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 MATN3O15232 486 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 CA12O43570 354 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 ZNF254O75437 659 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 SOX30O94993 753 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 VNN1O95497 513 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 HEXBP07686 556 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 SLC6A4P31645 630 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 CTSKP43235 329 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 OMPP47874 163 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 RPIAP49247 311 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 MECP2P51608 486 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 NRLP54845 237 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 C2orf80Q0P641 193 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 PEX6Q13608 980 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 DENND1AQ8TEH3 1009 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 NRG4Q8WWG1 115 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 XAGE5Q8WWM1 108 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 ST8SIA4Q92187 359 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 TXNDC15Q96J42 360 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 INIPQ9NRY2 104 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 B3GNT2Q9NY97 397 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 PCDHB1Q9Y5F3 818 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 AP1M2Q9Y6Q5 423 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 IGKV6D-41A0A0C4DH26 115 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 SLC22A2O15244 555 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 GDF10P55107 478 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 PSMA6P60900 246 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 SP2Q02086 613 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 MINDY4Q4G0A6 757 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 FBXO43Q4G163 708 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 BEND7Q8N7W2 519 aaPredicted RBP10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 ZBTB44Q8NCP5 570 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 CNTNAP3BQ96NU0 1288 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 VILLO15195 856 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 MATN4O95460 622 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 BMXP51813 675 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 INHBCP55103 352 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 MXD1Q05195 221 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 ZNF169Q14929 603 aaPredicted RBP10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 EXOC3L2Q2M3D2 409 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 TMEM220Q6QAJ8 160 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 HID1Q8IV36 788 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 ZNF283Q8N7M2 679 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 PRRG4Q9BZD6 226 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 RCOR3Q9P2K3 495 aaPredicted RBP10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 FBXW11Q9UKB1 542 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 ZNF175Q9Y473 711 aa10.8□□□□□ -0.68
SMARCE1-202ENST00000348513 LRRC72A6NJI9 287 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 C2CD4BA6NLJ0 364 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 TRAFD1O14545 582 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 NRP1O14786 923 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 OR1F1O43749 312 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 TULP3O75386 442 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 HTR3BO95264 441 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 FARS2O95363 451 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 AKT2P31751 481 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 CRHR1P34998 444 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 CSKP41240 450 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 ZNF155Q12901 538 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 C2orf27AQ580R0 203 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 ZDHHC20Q5W0Z9 365 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 CPNE8Q86YQ8 564 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 SLC35F3Q8IY50 421 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 OR6C4Q8NGE1 309 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 PIH1D2Q8WWB5 315 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 C1GALT1C1Q96EU7 318 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 LIN7BQ9HAP6 207 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 GKN1Q9NS71 199 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 MYOM1P52179 1685 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 A8MUA0 341 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 HTRA2O43464 458 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 CTRB1P17538 263 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms